| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3615 |
|---|
| Symbol | |
|---|
| ID | 7260633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3838984 |
|---|
| End bp | 3839943 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643563537 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002460068 |
|---|
| Protein GI | 219669633 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000857717 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATG TGAAGAGCAA ATATATCTAT TTATTCTTTG TTATTACTGT TCTAACCACT
CTGGTCATCC TTGGCTGTTC GTCAAGGCCC AATGAAGCGC CAGTACCGCA AAAACCTACT
ATCAATGAGG AAATTCAAAA CCAAGAACCA AGGGAAGAAC AAGAACCCAT CGAAAAGGAG
AGCGATAAGG ATGTGAGCCC TCCTGAAGCC GATAATCCAT TAGAGTCAGG AAATGACCCT
TTAGAATCTT TGGAGCCTAC ACAGCCTTTA CCGCCTGCAT CGCTTTCACC AGCCTTAAAA
TCGCCTATCC CTATACTCTA TTATCATTCC ATCGACTATG AAGAGGGCAA TGAGCTGAGA
GTACCTCCTG AGGAATTTGA AGCTCATATG GAGCACCTTT CCCAAAACGG CTATGAGAGC
GTTACCCTGG ATGATCTCTA TCAGTATTTT TATGCAGGGA AGGACCTTCC GGAAAAGGCT
TTTGTCTTGA CCTTTGATGA TGGTTACGAA GATAATTATA TTCACGCTTT TCCTATTGCG
GAGAAGTATG GATACAGCGG AACGGTTTTT GTAGTGACAG AATGGATTGG GGGAAAAGGA
TATTTAAACC GGCAACAATT GCTGGAAATG AACCAGGCCG GTTGGCAGAT TGAAAGTCAT
ACTGTGACCC ATCCTTATTT GGATAGTATT TCTACAGAAC AAATCAAAGA GGAGCTCCTC
ACTTCCAAAG AGGTTCTGGA AGAGTTGCTT GGTAAGCCGA AAGTCGCTTT TGCTTATCCC
TATGGAGTCT ATGACTCTTC CATTATTGAA TTATGCCGGG AAACAGGATA TAAAATGGGG
CTGACCATAG ACAGAGGGTG GGCCGGACCA GAGGATCCCT TTCGAATGAA GCGCGTCTAT
TGCTATGCTC AGATGGGCCT TGATGAGTTT AGGAGAAGGG TTGAAAATGC CAACTATTAA
|
|---|
| Protein sequence | MNHVKSKYIY LFFVITVLTT LVILGCSSRP NEAPVPQKPT INEEIQNQEP REEQEPIEKE
SDKDVSPPEA DNPLESGNDP LESLEPTQPL PPASLSPALK SPIPILYYHS IDYEEGNELR
VPPEEFEAHM EHLSQNGYES VTLDDLYQYF YAGKDLPEKA FVLTFDDGYE DNYIHAFPIA
EKYGYSGTVF VVTEWIGGKG YLNRQQLLEM NQAGWQIESH TVTHPYLDSI STEQIKEELL
TSKEVLEELL GKPKVAFAYP YGVYDSSIIE LCRETGYKMG LTIDRGWAGP EDPFRMKRVY
CYAQMGLDEF RRRVENANY
|
|---|
| |