| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3611 |
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| Symbol | |
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| ID | 7260629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3834977 |
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| End bp | 3837382 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643563533 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_002460064 |
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| Protein GI | 219669629 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000975309 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAA GAATATGGAC AAAACCACAA CCCCTTCCTG GGTTTAAAGA TAGTAGAAGC
CCGCTCCCCC AACGATTAGG GATTACTCCG GTAGTGGCAG ACATTCTCAG GCAGCGGGGC
ATCGAGGCAG AGGAGGAAAT CATGGAATTT CTCAGACCTT CTTTGCTTAA TTTAAATTCT
CCGTTTGCCT TTCGAGAAAT GGCTAGGGCT ATTGAGCGTT TAGAGCTGGC ACGGGCTCAA
GAAGAAAAAA TCCTTATCTA CGGCGATTAT GACGTTGATG GGGTAACCAG CACGGCTTTG
CTCTATAAAG TATTGACAGA TTTGGGGTTT AAGGCGGTCG CCTATATTCC CAGCAGGATG
GACGAAGGCT ATGGCTTACA TAAGGATGCT ATAACAAAAG CTTTGCAAGC CAATGTGAAG
GTGATGATCA CTGTGGATTG TGGCATTACC GCCGTGGAGG AAGTGGAGTA TGCTCGGTCT
CAGGGGATAG ATATTATCCT TACCGACCAT CATGAGCCGC CGGATAGTCT GCCTCAAGCT
TATGCCATTC TGAATCCCAA GGTTAAGGAT TCAGGATATC CTTTTCGGGA CTTAGCCGGA
GTAGGAGTAG CGTTTAAGCT GGCTCAGGCC TTGTTGGAGA GGTTAGAAGA GGGAAAATCA
GGTGCTTATG CGGTCCTGGA AATCTTAGAT TTAGCAGCTT TAGGTACCAT TGCTGATCTT
GTCCCCTTAA CCCATGAGAA CCGCATCATT GTGGCCTATG GCTTACGCCA GATGGAGAAT
ACCATTCATC TGGGACTGCG TACTCTTCTT GAGGAGTGCG GTCTGTGGGG AAAACCGCTT
AAAGCCGGGC AAATCGCCTT CATGGTGGCG CCGCGTATTA ATGCTGCAGG CCGCATGGAC
AGTGCCCGGG CCGGATTGGA GCTGTTGCTC ACAGGTCATG AAGAACGGGC TGTTGAGCTG
GCACGGTTTT TGAGCCGGGA GAATACCTTG CGCCAGGACA CCGAAAAGGA AATCTTTGCT
GAAGCGGTGG AGATTTTGGA GAAAAACCCT ATGCCACGGG TGATTGTTTT ATCAGGAAAG
AACTGGCATC ATGGGGTCAT CGGCATCGTG GCCTCCCGCT TGGTGGAGCG CTACTATCGC
CCGGTTTTCC TTATTGCTGA GGAAGAGGAG ATTGGGAAAG GGTCCGCCAG AGGGATTGGG
GGCTATCATG TATTGGATGA GCTCAAGGCT CAAGCAGAGT TGTTGGAGAA ATTCGGCGGA
CATAGTCAGG CCGCCGGCTT CTCGTTAAAA CTGGAAACTA TCCCCCTGCT TCGGGAGGCT
TTGAATCAGG CGGCCTTACA CCTTCCTGAG GAGATGTTCT ATGAACGGAT TCGTGTGGAC
CAATGCGTCC CTTTGGAAGT TCTTGATGCC TCTTTGCTGC ATGATTTGGA ACATCTGGCC
CCTTTTGGAT TTGGCAACCC CAGCCCGGTG CTGGCCGGAA GGGATTATCC CCTCTATATG
GCCGACACGG TGGGCAAAGA CCATGCTCAT TTAAAGTGTA TGTTCGGACC CCAAGGGGAA
TGGGAAGGAA TAGCCTTTCG CAAAGGGGAA GAGTTAGCCA ATATTTTGGG TTCGGCAACG
GTGGATGTTG CTTTTGGTTT GGATTGGAAT ACCTTTCGTG GCGCCCAGAG TATTCAGCTG
ATGATCAAAG ATATTCAGCC CCAAGCCTCA TGGCAGGAGG AGCATGACCG ATTCCTGGCC
GGGCAGGAGA TTGCCTTGGG TCAGGAGGAA ACGGCTGCAA GTGGCCTATA TCCTCAAGAA
CTGGAAATTA TGGATTGGCG AAGCAAAAAT CGGGAAGAAT GGAGCAAAAC CCTGGAAAGC
CGGGGGGACT CCGTTGCTCT TTGGGATTTT ACCGGGATAA GCCCTCAAGG GCCAGACGCA
GATCACCGGG CACCATGGGC TGTAGTCATA GGGGTTCCTC CATCGTGGCA AAGGGTTGCG
GATATGATCA GGCAGGTCCG GAACAGCGGT GGACAAGGAG TGATCCTGGC TGAAAGTCAG
ATTGATCCGC TGGTTCTGAA GGAGCGAACG GGTTATTTAG CGCGGGAAGA TCTTGTCCAA
ATGTACAGAG TATTATATGA TTTGGCTATT AAGAATAATC CGTTTACCTG GGTGGCAGAG
GAAATTCCCC TATGGCAAGC ACAGGCTGGA TTAAAGATCT TCGAAGAATT GAATTTGTTC
CGCTGTCTGC GCTATAGCTC CGATACCATC CATATCGAGT GGATCCCGGC CCAAAAGAAG
CTGGACCTGG AAGGAGCGCT GCGTTTTCGC GGGGCCAAAA GCCGCTGGGA GGAAGCCATG
GCGTTTAAAG AAGAATATTG TACGATGCCG TGGCCGGAGT TTAAGAAAAG GCTGGGCCGG
TACTAA
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| Protein sequence | MTKRIWTKPQ PLPGFKDSRS PLPQRLGITP VVADILRQRG IEAEEEIMEF LRPSLLNLNS
PFAFREMARA IERLELARAQ EEKILIYGDY DVDGVTSTAL LYKVLTDLGF KAVAYIPSRM
DEGYGLHKDA ITKALQANVK VMITVDCGIT AVEEVEYARS QGIDIILTDH HEPPDSLPQA
YAILNPKVKD SGYPFRDLAG VGVAFKLAQA LLERLEEGKS GAYAVLEILD LAALGTIADL
VPLTHENRII VAYGLRQMEN TIHLGLRTLL EECGLWGKPL KAGQIAFMVA PRINAAGRMD
SARAGLELLL TGHEERAVEL ARFLSRENTL RQDTEKEIFA EAVEILEKNP MPRVIVLSGK
NWHHGVIGIV ASRLVERYYR PVFLIAEEEE IGKGSARGIG GYHVLDELKA QAELLEKFGG
HSQAAGFSLK LETIPLLREA LNQAALHLPE EMFYERIRVD QCVPLEVLDA SLLHDLEHLA
PFGFGNPSPV LAGRDYPLYM ADTVGKDHAH LKCMFGPQGE WEGIAFRKGE ELANILGSAT
VDVAFGLDWN TFRGAQSIQL MIKDIQPQAS WQEEHDRFLA GQEIALGQEE TAASGLYPQE
LEIMDWRSKN REEWSKTLES RGDSVALWDF TGISPQGPDA DHRAPWAVVI GVPPSWQRVA
DMIRQVRNSG GQGVILAESQ IDPLVLKERT GYLAREDLVQ MYRVLYDLAI KNNPFTWVAE
EIPLWQAQAG LKIFEELNLF RCLRYSSDTI HIEWIPAQKK LDLEGALRFR GAKSRWEEAM
AFKEEYCTMP WPEFKKRLGR Y
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