| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3609 |
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| Symbol | |
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| ID | 7260627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3832221 |
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| End bp | 3834401 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643563531 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002460062 |
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| Protein GI | 219669627 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00130344 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATAA GCGAGCTCAT GGAAAAATTG CATAAAGCGT CTCCAGAAGG GATCAAGCTT
GTGGAGAAAG CTTATTCCTT TGCTGAAGAA GCTCACCGTG GGCAGCTTCG CAATTCAGGA
GAAGAATATA TTCAGCATCC TCTGGAAGTG GCCAAGATCC TCTTGGAACT GGAAATGGAT
GAGGCTACCA TTGCGGCGGC TTTCCTCCAT GATGTGGTGG AAGATACCCA TTACACCAAC
GAAGATATAG AAAGAGAGTT TGGCTCTCAA GTAGCTATCC TGGTCGATGG CGTCACGAAG
CTGGGGCGAA TCGAGTACAA GAGCAAGGAA GAGCTTCAGG TTGAAAACCT GCGCAAGATG
TTCCTGGCTA TGGCTAAGGA TATTCGGGTG ATTTTAATCA AGCTGGCGGA TCGTCTCCAC
AATATGCGGA CGCTGAAATT TCATTCTGAA AAAAAACAAA AGGAAATCGC TCTGGAAACC
CTGGAGATTT TCGCTCCTTT GGCCAACCGG CTGGGTATTT TCCGGATTAA ATGGGAGCTG
GAGGATTTAT CTTTCCGCTA CTTAAAACCT CAAGAGTATT ATGACTTATC GGAAGGAATT
GCTTTAAAAC GGGCAGAACG GGAAGTACAG ATCAATGAAG TCATCAGCCA GTTATCCAAG
CGCCTGGCTG AAGTAGGCAT CAAAGCGGAT ATATCAGGCC GTCCCAAGCA TTTTTACAGT
ATCTACCGGA AAATGATCAA TCAGCACAGA GAGCTCAGCG AAATCTACGA TTTAACTGCG
GTTCGGGTGA TCGTGGATTC TGTGAATGAT TGTTATGGTG CCCTGGGAAT CATTCATACG
ATGTGGAAGC CTTTGCCCGG CCGGTTTAAG GACTATATCG CCATGCCCAA GCCTAATATG
TATCAGTCTC TGCATACTAC GTTGGTAGGA GCCCATGGAG AACCCTTTGA GATCCAGATT
CGTACCTGGG AAATGCATCG TACTGCTGAA TACGGCATTG CCGCCCATTG GAAATATAAA
GAAGGGGCCG GCAAACCCGT CGGCGGTAAT TTTGAGCAGA AGCTGTCCTG GCTGCGGCAG
ATGTTGGAGT GGCAGCATGA TTCCCCGGAT GCCGGGGAAT TCATGGAATC ACTCAAAATA
GACCTGTTTG CCGATACGGT TTTTGTCTTT ACGCCCAAGG GAGATGTGGT GGAGCTGCCG
GCGGGCTCCT GTCCGGTTGA CTTTGCCTAT CGGGTTCATA CGGATGTAGG GCACCGCTGT
GTAGGGGCTA AGATTAACAG CCGCATTGTC CCGCTGGAAA CCAAATTGGC CAATGGGGAT
ATTGTGGAGA TTCTGACTTC CAAGCAGAGC AATGGACCCA GCCGGGATTG GCTTTCTTTC
GTAAAAACAT CTCAGGCGAA AAACAGAATT CGTGGGTGGT TTAAGAAGGA AAAGCGGGAA
GAAAATATTG TCCGCGGCCG GGAGGGAATC GAGCGGGAGG TGCGGAAGCT TGGCCTGGAT
CCAGCTCAAG TGCTTAAATC CGATCTTCTC TTAAAAATCG GTAAATCTTA TAATATAACT
AATGTGGAAG ATCTCTATGC CGCCATGGGA GACGGCGCCG TTACCGTGAA TAAGGTTCTG
GTGCGCTTAA AGGAAGATTT GACCAAGGAT GAACGGGAAC GGCTTCAGTT GGAGGCCCTG
CAGCAGGGAG AAGGTAAGCC TTCCAGTGGC TATGGGAAGG CGAGCCAAGG GGTAAGGGTC
AAGGGTGTGG ACAATATTCT TGTGCGCTTT TCCCGTTGTT GTAATCCTTT GCCCGGAGAT
GATATTGTTG GTTATATTAC CCGGGGCAGG GGGGTCTCCA TCCATCGCCG GGAGTGTGAT
AATGTCAAAG CTCATTCTCA GGAGGAGCAA GCCCGGATGG TGGAAGTGAT TTGGGATACG
GAAGTAGAAT CCATTTATCC GGTGGATTTG GAGATTTTCG CTTTAGACCG GCCGCGGCTG
GTTACCGATG TGATGAATGT GGTGATGGAG ACCCGCACGA ATATCTTGGG GATCAATGCC
CGGGTGGCCA AAGATAAGAA TACCCATATT CAACTGAGTA TTGAGATTCG CAATTTGGGA
CATTTGTATA ATGTGATGCA GAAAATCCGG CGGGTTAAAG ATGTCACATC TGTGGAGCGG
GTACATTTAG GAGGGCGTTA A
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| Protein sequence | MTISELMEKL HKASPEGIKL VEKAYSFAEE AHRGQLRNSG EEYIQHPLEV AKILLELEMD
EATIAAAFLH DVVEDTHYTN EDIEREFGSQ VAILVDGVTK LGRIEYKSKE ELQVENLRKM
FLAMAKDIRV ILIKLADRLH NMRTLKFHSE KKQKEIALET LEIFAPLANR LGIFRIKWEL
EDLSFRYLKP QEYYDLSEGI ALKRAEREVQ INEVISQLSK RLAEVGIKAD ISGRPKHFYS
IYRKMINQHR ELSEIYDLTA VRVIVDSVND CYGALGIIHT MWKPLPGRFK DYIAMPKPNM
YQSLHTTLVG AHGEPFEIQI RTWEMHRTAE YGIAAHWKYK EGAGKPVGGN FEQKLSWLRQ
MLEWQHDSPD AGEFMESLKI DLFADTVFVF TPKGDVVELP AGSCPVDFAY RVHTDVGHRC
VGAKINSRIV PLETKLANGD IVEILTSKQS NGPSRDWLSF VKTSQAKNRI RGWFKKEKRE
ENIVRGREGI EREVRKLGLD PAQVLKSDLL LKIGKSYNIT NVEDLYAAMG DGAVTVNKVL
VRLKEDLTKD ERERLQLEAL QQGEGKPSSG YGKASQGVRV KGVDNILVRF SRCCNPLPGD
DIVGYITRGR GVSIHRRECD NVKAHSQEEQ ARMVEVIWDT EVESIYPVDL EIFALDRPRL
VTDVMNVVME TRTNILGINA RVAKDKNTHI QLSIEIRNLG HLYNVMQKIR RVKDVTSVER
VHLGGR
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