Gene Dhaf_3606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3606 
Symbol 
ID7260624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3829559 
End bp3831115 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content50% 
IMG OID643563528 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_002460059 
Protein GI219669624 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG TTTTAAGAAG CCATACTTTA TCCCGCTCCG AACTGGAAGC GGGTCTTTCC 
TTAAGCCGGG CCTTTTTCCC TGAGGCACAG ATCGAAGTTG AGGACCTAAG CGGAGAAAAT
AATGCCGCCG GCTGCGGGGT GGGGATTATT CACATTGATA TTCATTATCC CGATACTCCC
TGGCAGATTG AAGGGAGTTT TAGGGGTCTT AGCTGCGGGA CCAAGTTAGG GTCTGGCAAA
AGCTCGGTTA TTCTCAATGA GGAGCAAATA AAATTTATTT TGTCCCATCC TTATGCAGGA
AAAGAAGATA AGCGGAAGTT TTTGCTGAAG AGGGGACTCT TGTCACTTCT TGCCCAGGTG
ACAGGACACA CTCCTCCCTG GGGAATCTTA ACGGGAATTC GCCCCAGTAA AATTCTTCAT
CGCTTAAAAG AGGCAGGATA CTCTTCTGAA GAGAGAGCGG CATCACTGGG GGAAGTGTAT
GCTATTCGTG AGGATAAGTC ACAATTGCTT CAGGAAGTGG TGGACATTCA ACAGCCCTTT
CTGGAAGATA TGAAAAGCCA TCCCCAGGAT GTAGCTGTAT ACATAGGGAT ACCCTTTTGC
CCTACCCGCT GCTCCTATTG CTCCTTCCCT GCCTATTCGT TAAAGCAGGG CAGAGAGCCT
CTGGAGCATT ATCTGCAGGG GTTAGGGGAA GAAATCAGGA CGGCAGGAGC ATGGATGAAG
GCTGGAGGAC TCACAGCCGA CTCCCTTTAT CTGGGCGGAG GAACTCCCAC TATACTCACG
ATTCGGGAGA TGGAAGGCCT GATCGCTTTA ATGATGACTC ATATTCCCCA TAGAGAGGCT
GGGGAATTTA CAGTAGAGGC CGGGCGGCCC GATACCTTGT CTGAAGGGAA ACTTTTGGCT
CTCCGTGCCA GCGGTGTCAA TCGGTTGAGC GTCAATCCTC AAACCATGCA TAATCGAACT
CTGCAACGGA TCGGTCGTGC CCATACTGTG GAAGATATAA TTAAAGCCTA TGAACTTGCC
CGTGAGATTC CGGGCTGGGT GATCAATATG GACTTGATTA TGGGGCTGCC TGGAGAAGGG
GCTAAGGATA TCCAGGAGAC TTTAGAGAGG ATCAGGGCAC TGGAACCTGA TAACCTTACC
GTCCATGCCT TAGCTATTAA ACGAGGCTCT AAAGAGCATG AGCAGGGTTC AACACAAAAC
CTGGGCAGGG AGTTGGAGGG AATGCAGGAA GACATCATGG CCGCTGTCCG CTCTATGGGG
ATGGAGCCCT ATTATCTCTA CCGCCAAAAG CATATCGCCG GCAATCTGGA GAACATCGGC
TTTGCCAAGC CCGGCTTGGC ATGCCGTTAT AATATTGGCA TCATGGAAGA GCGCCAAACG
GTCATCGGCC TGGGAGCGGG AGCTTCCAGC AAAATCGTTG ATCCCAGGGA CTTTTCCCTG
GTCAGTTTTC ATCATCCCGC GAACTGGCAG GTTTACCTGA AGCGATGGCG GGAGACCCAA
AGGAAGAGAG AAGAAGCAGA AAAATCTTTG GCTAAACATT TACATCCGCT TTACTAA
 
Protein sequence
MKIVLRSHTL SRSELEAGLS LSRAFFPEAQ IEVEDLSGEN NAAGCGVGII HIDIHYPDTP 
WQIEGSFRGL SCGTKLGSGK SSVILNEEQI KFILSHPYAG KEDKRKFLLK RGLLSLLAQV
TGHTPPWGIL TGIRPSKILH RLKEAGYSSE ERAASLGEVY AIREDKSQLL QEVVDIQQPF
LEDMKSHPQD VAVYIGIPFC PTRCSYCSFP AYSLKQGREP LEHYLQGLGE EIRTAGAWMK
AGGLTADSLY LGGGTPTILT IREMEGLIAL MMTHIPHREA GEFTVEAGRP DTLSEGKLLA
LRASGVNRLS VNPQTMHNRT LQRIGRAHTV EDIIKAYELA REIPGWVINM DLIMGLPGEG
AKDIQETLER IRALEPDNLT VHALAIKRGS KEHEQGSTQN LGRELEGMQE DIMAAVRSMG
MEPYYLYRQK HIAGNLENIG FAKPGLACRY NIGIMEERQT VIGLGAGASS KIVDPRDFSL
VSFHHPANWQ VYLKRWRETQ RKREEAEKSL AKHLHPLY