Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3598 |
Symbol | |
ID | 7260616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3821377 |
End bp | 3821901 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643563520 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002460051 |
Protein GI | 219669616 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000155283 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAACAAA AGATTATGAA CAGGGTGAAA CAGGCCCAAA ACGGCGATAA AGAAGCCTTG ATTCAATTGA TCATGAGTCA GAAGGAGGAC TATTATCGTC TGGCTTATGT TTATATGAAA AATCAGGAAG ATTCCCTGGA TGCGCTGGAA GATATGATTC TGAAAGTGTT TGAAAATATC AGGACGCTTA AAGATGCCGA AGCCTTCTTT AACTGGAGCA AAACGATTTT AGTCAATTGC TGTAAGCAGA ATTTGCGGAA GAAGAACAAA GTTATCCTGC TCCAGGAGCT GCCTGAAGAA GCCTATGAAG AAGCGTATAG TGTACACGAA GAGCGGATGA CCTTTGAAGC CTATTTAACC TCATTGAATC CACACTATCA GGAGGTTCTA AGGCTGCGGT TTTTACTGGA TATGGATTAT CAAACCATCG CCGATCTATT GAAAATCCCT CTGGGTACGG TGAAATCAAG AATGCACACC GGATTGCAAA AGCTAAAACA AAGGATGGAG GTGGAGCAGG TATGA
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Protein sequence | MEQKIMNRVK QAQNGDKEAL IQLIMSQKED YYRLAYVYMK NQEDSLDALE DMILKVFENI RTLKDAEAFF NWSKTILVNC CKQNLRKKNK VILLQELPEE AYEEAYSVHE ERMTFEAYLT SLNPHYQEVL RLRFLLDMDY QTIADLLKIP LGTVKSRMHT GLQKLKQRME VEQV
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