| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3565 |
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| Symbol | alaS |
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| ID | 7260583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3787542 |
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| End bp | 3790169 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643563488 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002460019 |
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| Protein GI | 219669584 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000341381 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATACAG GTAACCAGCT TAGAGACATG TTTTTAAACT TCTTTGCATC CAAAGGACAT
AGAATCTTAC CCAGTGCGTC TCTGATCCCC AAGGATGACC CTACCTTGCT TCTTACTGTA
GCCGGGATGG TTCCTTTTAA ACCCTATTTT ATGCGCAAAG TGGAGCCGCC TTTTCCTCGT
GCTACCACAT CACAAAAGTG TGTCCGTACA CCGGACTTAG AGGTAGTGGG TAAAACAGCC
CGCCATCATA CTTTTTTCGA AATGTTGGGG AACTTCTCCT TCGGTGACTA TTTCAAAGCT
GAAGCCATTC CCTGGGCTTG GGAGTTTGTG ACCGAGGTCT TGAAGCTGCC CATTGATCAG
CTGTGGATTA CGGTTCATCC GGAAGATGAA GAAGCTAAAA ATCTTTGGAT CGAAAAGACG
GGCGTATCTC CGGAGCGGAT TAAATATGAC CCGGAAAATT TATGGGCTGC CGGTCCTGTG
GGACCATGCG GCTACTGCTC GGAAATCTAT GTGGATTTAG GCGAAAGCCG GGGCTGCGGT
AAACCAGACT GTGCTTTAGG CTGCGATTGC GATCGCTTCC TGGAGATCTG GAATCTCGTC
TTTATGCAGT ATAACCGGGA TGAGTCCGGC CTGCTTACCC CGTTGCCCAA GCAAAATATC
GATACTGGGA TGGGTCTGGA GCGGATCGCT TCTGTCATGC AAGGCGCGGC TTCCAATTTT
GATACGGATT TATTCCTGCC GATCATCAAT AAAGTATCCG AACTTTCCGG AATCCCTTAC
CATGACAGCC CGAAAAATGA TGTTGCCATG AAGGTGGTTG CCGACCATAC CCGGGCTGTA
TCCTTCATGC TTTCCGATGG CATCCGTCCG GGCAGTGAAG GCCGTGGGTA TGTACTGCGC
CGGATTCTGC GCCGGGCCAT TCGTTATGCC CGTCTCCTGG GTATTGATAA ACCCTTCCTG
GAGCAGATCT TCCTGATCAT CCAGAGGGAC TACAGCCATC ATTATCCCGA ACTTAAAGAA
AATGAAAACT TCATCCTCAA TCATCTGCGC TTAGAGGAAA AGAACTTCCA GGCCACTTTA
GAGCAAGGAA CGCAAATTCT TCAGGACAAA GTCAAAACCC TTCAGGAAGC CGGAGAAACC
ATGCTCAGTG GGGCAGATGC CTTCTATCTC TATGAAACCT ATGGCTTCCC GGTGGAATTG
ACAGAAGAGA TGCTCATCGA ACAAGGGATG AGTGTGGATA TGGAAACCTT TAATGCTGCG
GCTGAAGAGC ATCGCCGTCT GGCTAAAGAG CAGTCCCAGC AGATGAAAGC AGTTCAAGAA
AGTGCCGCCA TCTCGGAAAA AGCCAAGGCC TTGGGCACGA CGCCCTTCCT GGGTTATCAT
GAACTGGCTG CCCACACTAG GGTGGAAGCA CTATTCCGGG ATGGAGAAGA GGTTAAGGAT
GCTGCCGAAG GAGACGAAGT CCTGATCTTC CTGAGGGAAT CTCCTTTCTA TGCCGAAAGC
GGAGGGCAAA TCTCCGACAG TGGCCTGATT CGCAGCCTAA GGGCTGAGGC AAAGCTTATC
GAAGTGAAGA AGGGTGTTAC AGGAACCGTC TATCATCGCT TCCTGCTCAC CCAGGGGGTC
TTGCATACCG GAGATGAAGT GGAGGCTTTG GTGGATGAAC ATCTGCGGCT GGCTACAGCC
CGTCATCACA GTGCCACTCA CCTTCTCCAA TCGGCTCTCC GTGCTGTATT GGGAGAGCAT
GTTCAGCAGG CAGGTTCCTT GGTCACGCCG GATCGTCTCC GCTTTGACTT CACCCATTTC
TCCGCCTTGA CCTCCGCTGA GTTGCAGCGG GTAGAGGATC TTTTGAACAA GGCGGTACTG
GCCAATATGC CTGTTGCGGC TGAAGAAATG AGCTTGGATG CGGCGAAGGC CAGCGGGGCC
ACGGCCCTTT TCGGAGAAAA ATACGGGGAT ACCGTTCGCG TTGTATCCAT GGGAGATTAT
TCCCTGGAGC TTTGCGGAGG AACCCATATT CATGCTACCG GAGATATCGG CTTGGTCAAG
ATCATCTCTG AGAGTGGGAT CGGAGCAGGC TTAAGGCGGA TCGAAGCCGT GGCAGGCGCG
GAAGCTCTTA AATATATGCG TTCCCTCAAT GACCAGATTC TCGACGCGGC CCAACTTCTC
AAAGCCCAGC CCTCGGATCT GCTCAAGCGC ATCCAAGGAC TCTTAGTCCA GGTCAAGGAT
CTGGAGAAGG AAGTTCAGCA GCTTAATGCC AAAGTGGCCA AATCCGAAGT GGAATCTCTC
CTGCAACAGG TCAAGGATGT GGAAGGGGTA CCTGTTCTGG CGGCTAAAGT CTCCGCTCAG
GATATGGATA CACTCCGCAA TACAGCGGAC CTTTTAAAGG ATAAAATGAA GGACGGTGTC
CTCGTTCTGG GGGCCGCTGT GGAAGGAAAG GTCAACTGGG TAACCGTTGT CACACCGGTA
GGTTTAAGGG GGCTTCATGC GGGGCAGATT ATTAAGGAAG TGGCCAAAAT CACCGGCGGT
GGCGGTGGCG GCCGCCCTGA TATGGCCCAA GCAGGGGGAA AAGATGCCGC TAAATTAGGG
GAAGCTCTCG ATCAGGTCCC TGGGATTATA AAAAGCCATA TAAAATAA
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| Protein sequence | MYTGNQLRDM FLNFFASKGH RILPSASLIP KDDPTLLLTV AGMVPFKPYF MRKVEPPFPR
ATTSQKCVRT PDLEVVGKTA RHHTFFEMLG NFSFGDYFKA EAIPWAWEFV TEVLKLPIDQ
LWITVHPEDE EAKNLWIEKT GVSPERIKYD PENLWAAGPV GPCGYCSEIY VDLGESRGCG
KPDCALGCDC DRFLEIWNLV FMQYNRDESG LLTPLPKQNI DTGMGLERIA SVMQGAASNF
DTDLFLPIIN KVSELSGIPY HDSPKNDVAM KVVADHTRAV SFMLSDGIRP GSEGRGYVLR
RILRRAIRYA RLLGIDKPFL EQIFLIIQRD YSHHYPELKE NENFILNHLR LEEKNFQATL
EQGTQILQDK VKTLQEAGET MLSGADAFYL YETYGFPVEL TEEMLIEQGM SVDMETFNAA
AEEHRRLAKE QSQQMKAVQE SAAISEKAKA LGTTPFLGYH ELAAHTRVEA LFRDGEEVKD
AAEGDEVLIF LRESPFYAES GGQISDSGLI RSLRAEAKLI EVKKGVTGTV YHRFLLTQGV
LHTGDEVEAL VDEHLRLATA RHHSATHLLQ SALRAVLGEH VQQAGSLVTP DRLRFDFTHF
SALTSAELQR VEDLLNKAVL ANMPVAAEEM SLDAAKASGA TALFGEKYGD TVRVVSMGDY
SLELCGGTHI HATGDIGLVK IISESGIGAG LRRIEAVAGA EALKYMRSLN DQILDAAQLL
KAQPSDLLKR IQGLLVQVKD LEKEVQQLNA KVAKSEVESL LQQVKDVEGV PVLAAKVSAQ
DMDTLRNTAD LLKDKMKDGV LVLGAAVEGK VNWVTVVTPV GLRGLHAGQI IKEVAKITGG
GGGGRPDMAQ AGGKDAAKLG EALDQVPGII KSHIK
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