Gene Dhaf_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3540 
Symbol 
ID7260558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3765883 
End bp3766218 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content47% 
IMG OID643563463 
Productbranched-chain amino acid transport 
Protein accessionYP_002459994 
Protein GI219669559 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1687] Predicted branched-chain amino acid permeases (azaleucine resistance) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000937407 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACTTA CCAGCCAACA GTCCCTTGTT ATCATCGCAG TGATCGCTCT GGGAACAATT 
CTCACCAGAG GGCTGCCCTT TCTTTTATTC CCTTCACATA AGGAGACGCC GGCTTTTATC
CTTTACCTTG GTCAGGTGAT TCCCTTCGCT GCTATTGCTA TGTTGATTAT CTATTGTCTA
AAAAATGTAT CCCTCCTGGC TGCTCCTTAT GGGCTGCCGG AAGGGATTGC CATCGGGTTT
ATCATCTTTA TTCATCTGTG GAAAAACAAT GTGCTGCTCA GCATCGGCGG AGGAACGGTG
CTCTATATGG CCCTGGTGCA ATTCGTGTTT GCCTGA
 
Protein sequence
MILTSQQSLV IIAVIALGTI LTRGLPFLLF PSHKETPAFI LYLGQVIPFA AIAMLIIYCL 
KNVSLLAAPY GLPEGIAIGF IIFIHLWKNN VLLSIGGGTV LYMALVQFVF A