Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3537 |
Symbol | |
ID | 7260555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3763374 |
End bp | 3764261 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643563460 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002459991 |
Protein GI | 219669556 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.784567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACGA TAACGGAATG GGAAAACCAT TCCGTTGTGC TATCCAAAAG CTTTGGGGGT GTAGACTTGG TAAAGCATTT TGCAGTGATT GGCGATCCGA TTGCTCATTC CTTATCTCCG GTGATGCATA ATGCCGGATA TAAGGCTTTA AACTTAGCTG CAGATTATCA AAAATTCCAG GTGAGCCCTG AGGATTTGGG AGAGGCCGTA TTGGGTCTTA AGGCTCTGGG CTTCAGCGGC TGGAATGTAA CCGTTCCCCA TAAGGAAACC ATTCTTCCTT TTCTGGATGA ACTGACAGAG GAGGCGGTCA GAGCAGGCGC TGTGAACACC GTAAAAGTGG ACAAGGGTCG GCTGATCGGC CATAACACCG ATGGTTCCGG CTTCGTTCGT TCCCTGCAGG AACATATGGA GTTAGATGAG CGACAACAAA TCGTTATCTT AGGAGCCGGA GGTGCCGCCA AGGGGATTGC TATGGCCCTG GCGCCTTTTC AAGCCCAGCT TTGCATCATG AACCGCACTC CTGAGCGGGG GGCGGAGTTG GTGGGAAAAG TACTAGAGTG GGGCGGACAA GCGCACCAGG AGGAATGGGG AAGGGGAGCC TGGCTGGTTC AGGCGGATTG CGTGATCCAA ACAACCAGCA TAGGCTTAAA AAAGGAAGAA TACCCTTTTT CTCTTGCAGG AATACGGCCA GGCACTCTGG TAGTGGACAT CATCTTTAAT CCTTGGGAGA CACCTTTCTT ACATTCGGCT AAAGCCATGG GCTGCAAGAC TGTCAACGGA ATCGATATGC TTCTTTATCA AGGGGTCAAT GCCTGGGAAT TCTGGCTGGA AGATAAGGCG CCTGTAGAAT CCATGAGGAA GGCTTTGTAT CAGGCTTTGG CAGTTTGA
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Protein sequence | MMTITEWENH SVVLSKSFGG VDLVKHFAVI GDPIAHSLSP VMHNAGYKAL NLAADYQKFQ VSPEDLGEAV LGLKALGFSG WNVTVPHKET ILPFLDELTE EAVRAGAVNT VKVDKGRLIG HNTDGSGFVR SLQEHMELDE RQQIVILGAG GAAKGIAMAL APFQAQLCIM NRTPERGAEL VGKVLEWGGQ AHQEEWGRGA WLVQADCVIQ TTSIGLKKEE YPFSLAGIRP GTLVVDIIFN PWETPFLHSA KAMGCKTVNG IDMLLYQGVN AWEFWLEDKA PVESMRKALY QALAV
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