Gene Dhaf_3537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3537 
Symbol 
ID7260555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3763374 
End bp3764261 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content51% 
IMG OID643563460 
Productshikimate 5-dehydrogenase 
Protein accessionYP_002459991 
Protein GI219669556 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.784567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACGA TAACGGAATG GGAAAACCAT TCCGTTGTGC TATCCAAAAG CTTTGGGGGT 
GTAGACTTGG TAAAGCATTT TGCAGTGATT GGCGATCCGA TTGCTCATTC CTTATCTCCG
GTGATGCATA ATGCCGGATA TAAGGCTTTA AACTTAGCTG CAGATTATCA AAAATTCCAG
GTGAGCCCTG AGGATTTGGG AGAGGCCGTA TTGGGTCTTA AGGCTCTGGG CTTCAGCGGC
TGGAATGTAA CCGTTCCCCA TAAGGAAACC ATTCTTCCTT TTCTGGATGA ACTGACAGAG
GAGGCGGTCA GAGCAGGCGC TGTGAACACC GTAAAAGTGG ACAAGGGTCG GCTGATCGGC
CATAACACCG ATGGTTCCGG CTTCGTTCGT TCCCTGCAGG AACATATGGA GTTAGATGAG
CGACAACAAA TCGTTATCTT AGGAGCCGGA GGTGCCGCCA AGGGGATTGC TATGGCCCTG
GCGCCTTTTC AAGCCCAGCT TTGCATCATG AACCGCACTC CTGAGCGGGG GGCGGAGTTG
GTGGGAAAAG TACTAGAGTG GGGCGGACAA GCGCACCAGG AGGAATGGGG AAGGGGAGCC
TGGCTGGTTC AGGCGGATTG CGTGATCCAA ACAACCAGCA TAGGCTTAAA AAAGGAAGAA
TACCCTTTTT CTCTTGCAGG AATACGGCCA GGCACTCTGG TAGTGGACAT CATCTTTAAT
CCTTGGGAGA CACCTTTCTT ACATTCGGCT AAAGCCATGG GCTGCAAGAC TGTCAACGGA
ATCGATATGC TTCTTTATCA AGGGGTCAAT GCCTGGGAAT TCTGGCTGGA AGATAAGGCG
CCTGTAGAAT CCATGAGGAA GGCTTTGTAT CAGGCTTTGG CAGTTTGA
 
Protein sequence
MMTITEWENH SVVLSKSFGG VDLVKHFAVI GDPIAHSLSP VMHNAGYKAL NLAADYQKFQ 
VSPEDLGEAV LGLKALGFSG WNVTVPHKET ILPFLDELTE EAVRAGAVNT VKVDKGRLIG
HNTDGSGFVR SLQEHMELDE RQQIVILGAG GAAKGIAMAL APFQAQLCIM NRTPERGAEL
VGKVLEWGGQ AHQEEWGRGA WLVQADCVIQ TTSIGLKKEE YPFSLAGIRP GTLVVDIIFN
PWETPFLHSA KAMGCKTVNG IDMLLYQGVN AWEFWLEDKA PVESMRKALY QALAV