Gene Dhaf_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3534 
Symbol 
ID7260552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3761031 
End bp3761654 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID643563457 
ProductShikimate kinase 
Protein accessionYP_002459988 
Protein GI219669553 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT TTTTTGAGCA TGAAATCACA TCTTTTAATG GAGATCCCTC TAAAAATGAT 
GCCTTGGAGG AGGGGGAGGG ACTCTCTGGC GCTGCTCATA ATGATAATAT TGTGCTTGTA 
GGCTTTATGG GTACCGGCAA AAGCACTGTG GGCAGGCGTT TGGCCAAGCT CCTGGGACGG 
GAGTTTATTG ATACGGATCT GGAGATCGAA AGACTAACGG AAATGACTGT ATCGGAAATT 
TTTCGCCGCC ATGGCGAGAC CCGTTTTCGT TCGGAGGAGC GGCTGTTGGT GAAACGTCTG 
GCTGAACATA AAGGGTATGT TATTGCTACA GGGGGAGGAA CTGTGCTGAA TCCTGAGAAT 
TGGCGGGATT TGGCACAAAG CGGTGTTATT ATCGGCTTAT ATGCGCCCCT TGATGAGATT 
TACAAACGAA TTGGCTATCG CAATGACCGT CCTCTTTTGA GAGGAGATCG CCAAGTGGTT 
GAAGAGCTGT GGGCCAAGAG ACAACCTATC TATAACCAGG CGAATTGGAC TATCGATACG 
ACTCATAAGG GAATTGAACA AGTGGTTGAA GAGATATTCA GCCTATATGA AGGAGGTTCT 
ATGGATGCAA GGACAGAGGA TTGA
 
Protein sequence
MNNFFEHEIT SFNGDPSKND ALEEGEGLSG AAHNDNIVLV GFMGTGKSTV GRRLAKLLGR 
EFIDTDLEIE RLTEMTVSEI FRRHGETRFR SEERLLVKRL AEHKGYVIAT GGGTVLNPEN 
WRDLAQSGVI IGLYAPLDEI YKRIGYRNDR PLLRGDRQVV EELWAKRQPI YNQANWTIDT 
THKGIEQVVE EIFSLYEGGS MDARTED