| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3524 |
|---|
| Symbol | |
|---|
| ID | 7260542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3752694 |
|---|
| End bp | 3753455 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643563447 |
|---|
| Product | peptidase A24A domain protein |
|---|
| Protein accession | YP_002459978 |
|---|
| Protein GI | 219669543 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0046971 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAATTG AACTCAGTGT ATTATCCGGA ATATTGGGGG TGATCATCGG CAGTTTTTTA
AATGTGGTGA TTTATCGTGT TCCCCAGGGA AAATCTATAA TTTTCCCTGG TTCCCACTGC
CCTGCATGTG GTCATAATCT TCGCCCCTGG GAACTGGTTC CGGTTCTAAG TTTCCTCATT
TTGAGGGGAC GGTGCGCTCA ATGCCGGGAG AAGATTTCAT GGCGTTACCC CTTAATCGAG
GGGCTCAATG GATCTCTGTA TTTTTATGCT GCCTGGGTGA ATCACAGCCG CTCATTTCTT
GAGTTGGGGA TAAACTTTTA TTTTATATCT GTGCTTTTAG TTCTCGCTGT TATTGATTGG
GATACCTACC GCCTGCCGGA TGTTTTCACT CTTCCTTTAC TGGGTGTCGG TATTGTGGCA
GGTTTTTTGC TGCCCCAGGG CCCATCGGGT TGGGAAAGCC TGGCTACGGC ACTGGGGGTA
GGAGGAGTGT TTTGGATGAT CACTCGGCTC TATCCTGAAG GGATGGGCTT AGGGGATATA
AAGCTTATTG CCGGATTGAG CGCATTTTTA GGATTTCCGG AAGCTTTAAT AGCTGTTTTC
ATCGCCAGTT TCACAGGATC CATAGGCGGA CTTATCATGT TGTCCTTTGA AAAAAGAAGT
TTCAGGGAAC AGATTCCCTT TGGGCCTTAT CTGGTACTGG GAGGTTGGAT TGTGTTCTTT
TGGGGACAAA CTATCCTTTC TTTTTATTAC TCTCTGTTTT GA
|
|---|
| Protein sequence | MGIELSVLSG ILGVIIGSFL NVVIYRVPQG KSIIFPGSHC PACGHNLRPW ELVPVLSFLI
LRGRCAQCRE KISWRYPLIE GLNGSLYFYA AWVNHSRSFL ELGINFYFIS VLLVLAVIDW
DTYRLPDVFT LPLLGVGIVA GFLLPQGPSG WESLATALGV GGVFWMITRL YPEGMGLGDI
KLIAGLSAFL GFPEALIAVF IASFTGSIGG LIMLSFEKRS FREQIPFGPY LVLGGWIVFF
WGQTILSFYY SLF
|
|---|
| |