Gene Dhaf_3508 details

Gene Information

• Locus tag: Dhaf_3508
• ID: 7260526
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 3739457
• End bp: 3741322
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 643563431
• Product: pyruvate carboxylase subunit B
• Protein accession: YP_002459962
• Protein GI: 219669527
• COG category: [C] Energy production and conversion; [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein; [COG5016] Pyruvate/oxaloacetate carboxyltransferase
• TIGRFAM ID: [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein; [TIGR01108] oxaloacetate decarboxylase alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000543633
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCGG TGAAAATTAC GGATACGACA CTGCGTGATG CTCATCAAAG CCTTTGGGCT 
ACGCGGATGA GAACAGAAGA TATGCTTCCT ATCCTGACCG AATTGGATCA AGTGGGATAC 
CATTCCCTTG AGGTCTGGGG CGGAGCGACC TTTGATGTGT GCCTGCGTTT TCTGGGGGAA 
GATCCCTGGG AACGATTAAG AACCATCAAA CAGCATGTCA AGAAAACCCC ACTGCAGATG 
TTGCTGAGAG GTCAATCCTT AGTGGGCTAT CAGCATTATC CTGATGATGT GGTTCGTGAA 
TTTGTCCAGC TTAGTGTAAA AAATGGAATT GATATTATCC GCATTTTCGA TGCGTTAAAT 
GATGTCCGCA ATATGATCGT TCCTATGGAA GCGGCTAAAG CAGCCGGAGC CCACGTTCAG 
GCTTCCGTGG TCTATACTAT CAGTCCTGTG CATACTTTGG AGCATTATGT GGAAACGGCT 
AAAGAACTTG TGGCTTTAGG CGCTGACTCT ATTTGTATTA AGGATATGGC GGGTCTCTTA 
ACCCCACAGC GCGGGTATAA ATTGGTAAGA ATGCTTAAAG AAGAATTGGG AGTCATGATC 
CAGCTGCATA CCCATTATAT TGGTGGTATG GGAACCATTG CCTATGTGAA AGCTGCCGAA 
GCCGGTGTGG ATGTCATCGA CACAGCCAGT GTTCCCTTAG CTTTCGGTGC CAGTCAGCCG 
CCGGTAGAGC TTGTGGTACG GGCACTTCAG GAGTTTGAAT TCGCTCCGGA GATGAATATT 
CCCCAGCTCT TTTCCATCGC TAATTATTTT GAAGAACTCC GCAAGAGCAG AGGCTTTGAA 
CGGGGAATCA CCCGTATTTC CGATATGCGG GTTTTTGAAC ATCAAGTGCC TGGGGGAATG 
ATCTCCAATC TCGTATCCCA ACTGGAAGAA CAAAAAGCCC TGAATCGGAT TAATGAAGTG 
CTTGACGAGA TACCCAGTGT TAGGGCAGAA TTGGGTTATC CACCTTTGGT AACGCCAACC 
AGCCAAATCG TGGGGACTCA AGCTGTATTG AATGTGTTGA GCGGGGCAAG ATATAAATTA 
GTGCCTGCCG AGGTGAAAGC CTATGTCCGT GGGCTTTACG GCAAACCGCC CGCACCCGTC 
GATCCCGAGA TTCAGAAGCT GATCATCGGC GATGAAGAAG TCCTCACTAT TCGTCCTGCG 
GACAAATTAG AACCTGGTCT TAAAAAGGCG GAACAGGAAA GCAAAGAGTT TGCCTTATCC 
CGTGAAGATG TCTTGAGTTA TGCCCTGTTT CCACAGGTGG CTAAAAAGTT CTTTATTGAA 
AGAGAGAAGG GGATCACGGT CGCTGCGAAA AGCCCGTCCG TCCCAGTTGC GAAGGAGGAT 
TCCAAAATGG ATTTAAAAGA AATTAAAGAG CTTATTAAAC TTATTGGTGA CACAGATATC 
ACCGAGTTGA ACCTTGAAAG TGAAGGAGTA AAGGTCTCCA TTAAAAAGGG CAGCATGCCC 
GTACCAGCCA TGGCGCTGCC TGTCATGGGA GGAACCGCTG AAGCTGCTGT TCAGCCTGCA 
CCGGCGGCAG TCAGTGCACC GGTTAAAGTT GTCCAGGAAC CGCAAAGCCC TGCTGAGGCT 
CCTAAGAAAA ATCTGCAGTA CATCAAGGCC CCTATGGTGG GAACCTTCTA TCGTTCACCG 
GCACCGGATG CTCCATCCTT TGTGGAGCGG GGGCAGATGG TGAAAGAGTC CCAAACGGTA 
TGCATCATTG AAGCGATGAA ACTCATGAAT GAGATAGAAG CAGAAATCAG TGGACGCATC 
GTGGAAATTT TGGTTGAAAA CGGCCAGCCG GTGGAGTTCG GTCAACCTTT GTTTGCAGTT 
GAATAA 

 

Protein sequence

MKPVKITDTT LRDAHQSLWA TRMRTEDMLP ILTELDQVGY HSLEVWGGAT FDVCLRFLGE 
DPWERLRTIK QHVKKTPLQM LLRGQSLVGY QHYPDDVVRE FVQLSVKNGI DIIRIFDALN 
DVRNMIVPME AAKAAGAHVQ ASVVYTISPV HTLEHYVETA KELVALGADS ICIKDMAGLL 
TPQRGYKLVR MLKEELGVMI QLHTHYIGGM GTIAYVKAAE AGVDVIDTAS VPLAFGASQP 
PVELVVRALQ EFEFAPEMNI PQLFSIANYF EELRKSRGFE RGITRISDMR VFEHQVPGGM 
ISNLVSQLEE QKALNRINEV LDEIPSVRAE LGYPPLVTPT SQIVGTQAVL NVLSGARYKL 
VPAEVKAYVR GLYGKPPAPV DPEIQKLIIG DEEVLTIRPA DKLEPGLKKA EQESKEFALS 
REDVLSYALF PQVAKKFFIE REKGITVAAK SPSVPVAKED SKMDLKEIKE LIKLIGDTDI 
TELNLESEGV KVSIKKGSMP VPAMALPVMG GTAEAAVQPA PAAVSAPVKV VQEPQSPAEA 
PKKNLQYIKA PMVGTFYRSP APDAPSFVER GQMVKESQTV CIIEAMKLMN EIEAEISGRI 
VEILVENGQP VEFGQPLFAV E