| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3501 |
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| Symbol | |
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| ID | 7260519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3733244 |
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| End bp | 3734635 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643563424 |
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| Product | glutamate synthase (NADPH), homotetrameric |
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| Protein accession | YP_002459955 |
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| Protein GI | 219669520 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.860483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTAA AAGTACCCCG TCATGAGATG CCCTGCCAGG ACCCTAAAGA GCGTGCTCAC
AATTTCAATG AAGTTGCCTT GGGATATGCT TCGGAAACGG CTATCGAAGA GGCTCAACGT
TGTCTCCAAT GCAAAAAACC GAAATGTGTT GAAGGCTGCC CGGTGAATAT TTCCATTCCT
GAGTTCATTC AAAAAATCAC GGAAGAAGAT TTTGAAGGAG CCGCAGCGGT TATCAAGCAG
AGCAGTTCTT TGCCTGCAGT GTGCGGCCGG GTTTGTCCCC AGGAGTCCCA ATGTGAGGCT
AAATGTATCT TAGGCATCAA AGGTGAATCG GTGGCCATTG GCCGTTTGGA GCGCTTTGTG
GCTGATTACG AAATCAGCAA AGGATGTAAG ATTCCCGAAG TGGCTCCACC CAGCGGTAAA
AAGGTGGCGA TCATCGGTGC CGGTCCGGCA GGATTAGCCT GTGCCGGTGA TTTGGCTAAG
GCTGGGCACA AAGTGACGAT CTTTGAAGCT CTCCATGTGG CCGGCGGCGT GCTGATGTAT
GGTATTCCTG AGTTCCGTCT GCCCAAAGAT ATTGTCCAAA ATGAGATTTG CAATTTGGAA
CCGATGGGTG TGGAGATTCT GGTTAACCAA GTGGTGGGCA AAGTGACCTC CGTTCATGAG
CTTATGCAAA ACGGCTATGA TGCGGTGTTC ATCGGCACAG GGGCTGGATT GCCTAATTTC
CTGGGAATTC CCGGTGAAAA TTTAAATGGC GTCTATTCCG CCAATGAGTT CTTAACCCGT
ACTAATCTTA TGAAGGGATA TCGCTTCCCT GAGTATAAGA CCCCGGTTAA AATAGGCAAA
AAAGTCGCTG TCTTTGGGGC CGGCAACGTG GCTATGGATG CTGCCCGTAC TGCCCTGCGT
TTGGGCGCGG AAGAAGTCAG CATTGTCTAT CGTCGTTCCC GGGCGGAAAT GCCTGCCCGT
CATGAAGAGC TTGAGCACGC CGAGGAAGAA GGGGTTAACT TCCAGCTCTT GACCAACCCG
GTAGCCATCC AAGGGGATGA AAAGGGTGCG GTCAAGTCCC TGACCTGTCT CCGCTATGAG
TTGGGAGAAC CGGATGCCTC CGGACGCCGT AAACCTGTGC CCATCCCCGG CTCGGAGTTT
GAGATTGAAG TGGATACGGT GGTTGTCGCC ATTGGGCAAG GTCCCAATCC TTTGGTCACC
CAATCCACGG AAGGCTTGGA GCTGAACAAA TGGGGCAATA TCGTCGTTAA TGAAGAAACC
CTGGAGACCT CCATTCCCGG AGTGTTCGCC GGGGGCGATA TTGTGACCGG TGCCGCTACG
GTTATTCTGG CTATGGGAGC CGGCAAGAAA GCCGCCGCGG GAATTAACGC TTATCTTAAG
AATAAGGGTT AA
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| Protein sequence | MALKVPRHEM PCQDPKERAH NFNEVALGYA SETAIEEAQR CLQCKKPKCV EGCPVNISIP
EFIQKITEED FEGAAAVIKQ SSSLPAVCGR VCPQESQCEA KCILGIKGES VAIGRLERFV
ADYEISKGCK IPEVAPPSGK KVAIIGAGPA GLACAGDLAK AGHKVTIFEA LHVAGGVLMY
GIPEFRLPKD IVQNEICNLE PMGVEILVNQ VVGKVTSVHE LMQNGYDAVF IGTGAGLPNF
LGIPGENLNG VYSANEFLTR TNLMKGYRFP EYKTPVKIGK KVAVFGAGNV AMDAARTALR
LGAEEVSIVY RRSRAEMPAR HEELEHAEEE GVNFQLLTNP VAIQGDEKGA VKSLTCLRYE
LGEPDASGRR KPVPIPGSEF EIEVDTVVVA IGQGPNPLVT QSTEGLELNK WGNIVVNEET
LETSIPGVFA GGDIVTGAAT VILAMGAGKK AAAGINAYLK NKG
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