Gene Dhaf_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3479 
Symbol 
ID7260497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3713261 
End bp3714136 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content45% 
IMG OID643563402 
Productmethionine aminopeptidase, type I 
Protein accessionYP_002459933 
Protein GI219669498 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.234162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACA AATTAGGCAG GAATGAAGAG TGTTGGTGTG GCAGCGGGCA AAAGTACAAA 
AAGTGTCATG CCAGCATAGA AGAAAAAATT AAAAGCTATG CCGCGAAAGG CTATGCGATA
CCGGACCGCA GCTTACTAAA AAACCAAAAA CAGATTGAGG GCATCCGCGG GAGCAGTAAA
ATCAATATAG CCCTGCTGGA CTATATAGGG GATTTTGTCG TCGAAGGTGT AACTACCGAA
GAGCTTGATC GGCTCATCTA TAACAAGACA AAGGAACTGG GCGGAATACC TGCAACCCTG
AACTACAAGG GATATCAAAA AAGTAGTTGT ATCTCTGTCA ATGACATAGT ATGTCACGGT
GTCCCATCAA GGGGGGTAAG GCTGCGAAAC GGGGATATAG TCAACATTGA CGTTTCCACT
CTCTACAAGG GGTTTTATTC AGATTCATCA CGCATGTTTT GTATTGGTGA AGTCTCTGTT
GAAAAAAGAA AACTTGTCAC GGTGGCAAAA GAATGCACTG AGCTGGGAGT GCAAGAGGTT
AAACCATGGG GATTTCTTGG TGATGTGGGG CAAGCGGTGA ATGACCATGC CAAAAAGAAC
GGCTATACTG TTGTGAAAGA GATAGGCGGA CATGGTATTG GGGAAAAGTT CCATGAAGAT
CCATGGGTGG GCTATGTATC TAAACGAGGT ACAGGAATGT TGCTTGTACC TGGACTGATT
TTCACTGTAG AACCGATGAT CAATATGGGC AAGGCAGGAA TAGTTCTCGA CCAAAACGAT
GGTTGGACGG TTTATACAGC CGATGGCAAG CCCTCTGCCC AATGGGAAAA GACAGTTCTT
GTTACGGATA CAGGATGCGA AATATTGACG TATTAA
 
Protein sequence
MSDKLGRNEE CWCGSGQKYK KCHASIEEKI KSYAAKGYAI PDRSLLKNQK QIEGIRGSSK 
INIALLDYIG DFVVEGVTTE ELDRLIYNKT KELGGIPATL NYKGYQKSSC ISVNDIVCHG
VPSRGVRLRN GDIVNIDVST LYKGFYSDSS RMFCIGEVSV EKRKLVTVAK ECTELGVQEV
KPWGFLGDVG QAVNDHAKKN GYTVVKEIGG HGIGEKFHED PWVGYVSKRG TGMLLVPGLI
FTVEPMINMG KAGIVLDQND GWTVYTADGK PSAQWEKTVL VTDTGCEILT Y