Gene Dhaf_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3465 
Symbol 
ID7260483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3697725 
End bp3699797 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content49% 
IMG OID643563388 
Productsecreted protein 
Protein accessionYP_002459919 
Protein GI219669484 
COG category[R] General function prediction only 
COG ID[COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGGGC AAAAGATGGG TTTGGCTCTG GTGATGGCGT GTTTGCTCAC TCTTCTGGGC 
TGGAATGCTT ACCAGACGAA GACCATAGCA GCAAGCGGCG ATGAAAAAAT AGGAGCAGAA
GGTCCGCAAA AGGTAGGGCA GGAGGCGCCG GTGGAACCGC TGCCGACTGT GGGTTCTTTT
GAAAACTTCA AGAAACTGAT GGCGGAAGCC GAGTCGCGCA CCAGGAATGT TGTGATGTAC
AGCGGTGGCG ATATAGCTGC TGCTGAGAGT AGCCCGCAGG CTTCAGCCGC TTCTTCGGCA
GGGAATCTTT TAGACGGTAA GCTGGATTAT TCCGAAACCA ATGTTCAGGT CCAGGGGGTA
GATGAGGCCG ATACGGTTAA AACAGACGGG AAATACATCT ATAAGCTCAC CGATAATCAG
CTGATCATAG CCAAAGCCTA TCCGGTGGAA GAGATGGAAG TCGTTGCTGC TCTGCAGTTT
GACGGGGAAG TTCATCCTCT GGAGATGTAT GTGGACGACC AGTATCTGAC CGTTATTCTC
AACCAAAACT ATGCTTGGCG GCAAGTTTAT CCGGCACCGG CTCCTCCTTT TGAAAACAGT
GTCAAGGTTC TGATCTATGA TCTGGCTGAT CCCAGCAATC TGAAGCAGGT CAGGGAACTG
GAGCTTGACG GAAGCTATCT TTCCTCAAGA AAAATCGGCG ATACTCTCTA TCTGGTCAAT
AATAAATACA TTCCCCTTTA CCGGCTGCAG GAGCAACCGG AGGCACTGCT GACCCCCGGC
TATCGGGACA GCCTGGAAGG CGGGGAGATT CAGCGGATCG GTTATGAAGA AATATGCTAT
TTTCCGGGGT CCCCTCAACC GAATTACCTG CTGATTGCCG GAATTGATCT CGGCAACCTG
AGTACCAAAA AGACGGAAGT AAAAACTTAT CTGGGAGCCG GTGAGAATAT CTACAGTTCT
TTAGAAAATC TCTATGTGGC CGTACCCGAG TATAAATACG AGCAAGTCCA GCCCCTTCCG
GAGCCGGCTG ATACGGCAGG CAGCAATACC TCTGCCATGT CCAGAATGAT TGCGGTCATG
CCGGCGGAAG TGAACACCAG TGTTTATAAA TTCAACTTGC AGGCTGGAGA TACAAAGTAT
TTGGGGATGG GCAGCGTACC CGGCAATATC CTCAATCAGT TCAGCATGGA TGAACATAAC
GGCTATTTCC GGATTGCAAC CACCCTTCAG AAATTGCCGG TTCGGACAGG AGAAGCGGAA
CTGACCAATA ATCTTCATAT TTTGGATCAA AGCATGAAGC AAGCAGGGAA AATAGAAAAC
ATCGCTCCCG GAGAGAAAAT TTATTCGGTT CGTTTTATGG GGGATAGGGG CTATATGGTC
ACCTTTAAAA CAGTAGATCC CTTGTTCGTT CTGGACTTAA AAGATCCCAA TCATCCCGCT
GTTCTCGGTG AACTTAAAAT CCCTGGTTAC AGCAATTACC TTCATCCTTA TGATGAGAAT
CATATTATCG GCTTTGGGAA AGAGGCCATA GAAGTGGAAG ATCCGCACTG GTCGGGTGAA
GGAACGGTGA AAAATGCCTA TTACCTTGGC ATGAAGGTGG CTCTCTTTGA TGTCAGTGAT
GTGAACAACC CCCAGGAGAA ATTTAAAGTT GAAATCGGGG ACAGAGGAAC GGAGTCGGAA
TTGTTCTGGA ACCATAAAGC CCTTCTTTTT GATCGGGAAA AAGGCATCCT GTCCTTCCCG
GTGACCGTTT GCGATATTGA CCCGGCCACC GTCAACAAAG ACGATTATCT GGCTCAAAAA
GACCCGCGCT TGGCCTATGG GCAGCCGGTT TTCCAGGGAG CTTTTGTTTA TGATCTTTCC
GCTGAAGAGG GCTTCACCCT GAAAGGGATG ATAACCCACC ATCCTCCGGG AGAAGTGGTG
AATCTTCAAA ATACTGGGCG CTATGATTAC AACCGGGATA TTTCCCGCAG CCTCTATATC
GGAGATACAC TTTACACCTT ATCCAACAGC TATCTGCAAG CTAATGATTT AAACACCATG
GAGGAGCAGG GGAAACTGGA GATTCATAAC TAG
 
Protein sequence
MKGQKMGLAL VMACLLTLLG WNAYQTKTIA ASGDEKIGAE GPQKVGQEAP VEPLPTVGSF 
ENFKKLMAEA ESRTRNVVMY SGGDIAAAES SPQASAASSA GNLLDGKLDY SETNVQVQGV
DEADTVKTDG KYIYKLTDNQ LIIAKAYPVE EMEVVAALQF DGEVHPLEMY VDDQYLTVIL
NQNYAWRQVY PAPAPPFENS VKVLIYDLAD PSNLKQVREL ELDGSYLSSR KIGDTLYLVN
NKYIPLYRLQ EQPEALLTPG YRDSLEGGEI QRIGYEEICY FPGSPQPNYL LIAGIDLGNL
STKKTEVKTY LGAGENIYSS LENLYVAVPE YKYEQVQPLP EPADTAGSNT SAMSRMIAVM
PAEVNTSVYK FNLQAGDTKY LGMGSVPGNI LNQFSMDEHN GYFRIATTLQ KLPVRTGEAE
LTNNLHILDQ SMKQAGKIEN IAPGEKIYSV RFMGDRGYMV TFKTVDPLFV LDLKDPNHPA
VLGELKIPGY SNYLHPYDEN HIIGFGKEAI EVEDPHWSGE GTVKNAYYLG MKVALFDVSD
VNNPQEKFKV EIGDRGTESE LFWNHKALLF DREKGILSFP VTVCDIDPAT VNKDDYLAQK
DPRLAYGQPV FQGAFVYDLS AEEGFTLKGM ITHHPPGEVV NLQNTGRYDY NRDISRSLYI
GDTLYTLSNS YLQANDLNTM EEQGKLEIHN