Gene Dhaf_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3450 
Symbol 
ID7260468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3683502 
End bp3684470 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content50% 
IMG OID643563373 
Producttyrosine recombinase XerD 
Protein accessionYP_002459904 
Protein GI219669469 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGTTC AAACAGAAGC TTGGCTTAAG AAATATTTGA GCTACCTTAA TGTGGAACGA 
GGGCTTTCCC CCAATACCCG AAACAGCTAT GAACGCGATT TGCGGAAATT CACAGCCTTT
CTTCAACAAC GTGGGAAAAA CATTATAGCT TGTGAGGGCA ACGACCTTTT CTTATTTCTT
CTCCAGGAGA AGAATCAGGG GAGGTCTGCC CGCACATTGG CGCGGTACCT CGCAACCCTG
CGGGGTTTCT TTGCTTTTCT CTTAGGGGAG GAGATGCGGG AAGATGATCC CACCGAGTAC
CTGAGCACTC CGAAGCTTGA ACAGCATCTG CCCCATGTTC TGTCTGAGGG GTCAATCAGC
AAGCTTATGG GTGAGGGAGG GGACCGGGAC AAAGAAGGGC CCAAACCTGG CAAGAGCAGT
AAAAAAGCTG GGGATTCTGA CTCAGAAGGG AAGGATAAGG GACTATTGAT GCGTAATATG
GCCATGATCG AGGTACTCTA TGGTTGTGGC TTGCGTGTCT CCGAACTGGT GGGCTTAAAG
GTTTCGGATA TCATCTTTGA GACGAGGACC CTGCGCTGCC GGGGCAAGGG GAACAAAGAA
AGGATTGTCC CCATCGGCGA ATATGCCCTT GAGGTTTTGC AGAATTATCT GGAGCATGAT
CGGGAACGCC TGAGGGGAAA GCATAAAACG GAAGTCCTCT TCCTTAATTC CCGAGGTACG
GCTCTGACCC GGCAAGGAAT TTGGGATATC CTCAAAAAAT GGGCACAAAC CCATGGTGTT
CAGGAAAATA TTTATCCTCA TAAATTCAGA CACAGTTTTG CTACTCATCT CTTGGATCAT
GGAGCGGATT TACGTTCTGT CCAGGAAATG CTGGGGCATG CCGATATTGC CACGACCCAG
ATTTATACCC ATCTTTCCCG TCAAAGGCTG TTGGAAGTAT TCCGCAAAGC CCATCCCCGG
GCTGATTAA
 
Protein sequence
MEVQTEAWLK KYLSYLNVER GLSPNTRNSY ERDLRKFTAF LQQRGKNIIA CEGNDLFLFL 
LQEKNQGRSA RTLARYLATL RGFFAFLLGE EMREDDPTEY LSTPKLEQHL PHVLSEGSIS
KLMGEGGDRD KEGPKPGKSS KKAGDSDSEG KDKGLLMRNM AMIEVLYGCG LRVSELVGLK
VSDIIFETRT LRCRGKGNKE RIVPIGEYAL EVLQNYLEHD RERLRGKHKT EVLFLNSRGT
ALTRQGIWDI LKKWAQTHGV QENIYPHKFR HSFATHLLDH GADLRSVQEM LGHADIATTQ
IYTHLSRQRL LEVFRKAHPR AD