Gene Dhaf_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3443 
Symbol 
ID7260461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3676364 
End bp3677506 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content50% 
IMG OID643563366 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002459897 
Protein GI219669462 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAA CATTATCGTG GGTTTTTGCT TTGGCGTTAT TCATTGGCAA TCTGGCCGTT 
CCCCATCAGG CCTATGGTGC CGTACTGGAG ACCGAGGCAG CGAGTGCGAT TCTGATGGAT
GCTAAGTCCG GTCAAATACT TTTTGAAAAA GAAATCCATA AAGAACTGCC GCCGGCCAGC
GTGACCAAGT TGATGACTTT GTTAGTGGCC GCGGAGGCGG TTGAATCGGG ACGGGTCAGC
CTCACCGATA AAGTAACCGC CAGTGAAGGG GCCAGCAGTT TAGGCGGTTC GCAAATCTAT
CTGGAGCCGG GGGAGACCTT TTCTCTGGAA GAGATGTTGA TTTCGATCGC GGTGGGCTCG
GCCAATGATG CCTGTTATGC CGTAGGAGAA CATATCAGCG GCACTCACGA GGCCTTTGTG
GAAGAGATGA ATAAGAAGGC CAAGGAGATT GGCGCTAATC ATACCCATTT TGTCAATGCC
TATGGTTTAC CGGCACAAGG ACACTATACC AGTGCCTATG ATCTGGCCCT GATGGGTCGT
GAAGCTTTAA AGTATCCTCT GGTCCGCAAA TTGACAAATA TGAAAGAGTA TGATTTGCGC
GGGGGTAAAT TCAAGCTCTG GAATACCAAT AAGCTGCTGT GGTGGTATGA GGGAGCCGAT
GGCTTTAAAA CCGGTTGGAC CAGTGAAGCG AATTATTGCC TTGCCTCCAC CGTCGAGCGG
GATGGGCTGC GCCTGATTGC AGTGGTCATG GGAGTTCCTC AGGTCAGGGG ACATTTTACG
GAATCCATGA AGCTGTACAA TTATGGCTTC GCCAACTATG CCTATAAAGA ATATGCCCCC
GTTGGTCAGA AACAAGGAGT GATTAAGGTC CGCAAGGGAA TGGAGGAAGA TCTGGTAGCT
GTTACGGAAA AAGCCCTGGG AGTCACCGTG CCGAAAGGCA GCGACAAAAA CATCTGGGCC
GAGACGAAGC TCAACCCAGA TGTGGAAGCG CCTGTGAAAG CGGGTCAAAA GGTGGGGGAA
ATCCTTCTCT ATCGCGATAA TGAATTAATG GCCTCCGTGA ATCTGGTGGC CGAAAAGGAT
ATCGAGAAAG CAGGAATTGG CAAGCAAATT CTTCGTACTT TCGAAGGAGT ATTTGGATTT
TAA
 
Protein sequence
MRKTLSWVFA LALFIGNLAV PHQAYGAVLE TEAASAILMD AKSGQILFEK EIHKELPPAS 
VTKLMTLLVA AEAVESGRVS LTDKVTASEG ASSLGGSQIY LEPGETFSLE EMLISIAVGS
ANDACYAVGE HISGTHEAFV EEMNKKAKEI GANHTHFVNA YGLPAQGHYT SAYDLALMGR
EALKYPLVRK LTNMKEYDLR GGKFKLWNTN KLLWWYEGAD GFKTGWTSEA NYCLASTVER
DGLRLIAVVM GVPQVRGHFT ESMKLYNYGF ANYAYKEYAP VGQKQGVIKV RKGMEEDLVA
VTEKALGVTV PKGSDKNIWA ETKLNPDVEA PVKAGQKVGE ILLYRDNELM ASVNLVAEKD
IEKAGIGKQI LRTFEGVFGF