| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3417 |
|---|
| Symbol | |
|---|
| ID | 7260435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3652286 |
|---|
| End bp | 3653320 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643563340 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_002459871 |
|---|
| Protein GI | 219669436 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 99 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCATA CCGTTTATAT CTCGGATGAT TATGATCTGC AGGAGACCAT GGATAATATC
AGTGCCAGGC TGAGTGAATG CGGTATCCGT GTAATCCGCG GACCCAAGAC CATTAAGGGG
AAAAAGCTGG TCATTTCTCC GGAGGAATAT GAAAAGTACT TCGCAGATGT GGAGGTAGCT
TTGTTCAGTT CCCGTTCTGT CTGTCCGGCA GAACTGATCC GTTGCGCACG AAAACTGAAG
GGTCTGGTCT GCCCGACCAT CGGCACAGAT AGTCTGGACA TGAAGACAGC CAATGAACTG
GGCATTATTG TCGGCAATGG GGCGTGTCCG GAAAATTATA TCGGAATGGC TGAGGCCAAT
GTTCTGCTGA CCCTGATGCT GATGTATAAC CCGAACAAAT CCATGGAAAT TGTGCAGAAG
AACCTGCCCA AGCCGGTGGA ATCCCAGCAC TGGGCCCGTT TGCTTTGGCA AAAGACGGTG
GGTGTGATCG GCTTTGGCCG TATTGGCAGG GCCTATATTG AGCGGCTGCA GAATTTTGAT
CTCCGTATTT TGGTATATGA CCCCTATGTT AAGGTGGAAG CAATCCCAGC CTATGCTCAG
ATAACCGACC TGGACACCCT GCTGAGGGAA AGCGATCTGG TTAATGTGTT TCTGCCGGTC
AACGAGGAGA CACGGGACCT GGTCAATGAT CAATTCCTGA GCAAGATGAA ACCAACCGCC
TACTTTATCA ATACCTCCAG AGGCCAGATT GTTGATGAAG ATGCCCTTTG CCGGGCTTTA
CGGGAAAAGC GGATTGCCGG GGCGGCTTTG GATACCTTTA AGGTAGAGCC CCTGCCTCTG
GACAGTCCGC TCCGGGAATT CGGCAATCTG ATTCTGACCC CCCATTTAAT CGGTCACACC
CTGGAAAATC AACTGGCCTT TGCCGATATA GGGGTAGAAA ATATCACCAG GATTCTCAAA
GGTGAGCTGC CGCTGTACTG CGTCAATCCT CAGACGGAAC AGCGGTGGCG CGAGCGCTTG
GCCACGCTGG CCTGA
|
|---|
| Protein sequence | MAHTVYISDD YDLQETMDNI SARLSECGIR VIRGPKTIKG KKLVISPEEY EKYFADVEVA
LFSSRSVCPA ELIRCARKLK GLVCPTIGTD SLDMKTANEL GIIVGNGACP ENYIGMAEAN
VLLTLMLMYN PNKSMEIVQK NLPKPVESQH WARLLWQKTV GVIGFGRIGR AYIERLQNFD
LRILVYDPYV KVEAIPAYAQ ITDLDTLLRE SDLVNVFLPV NEETRDLVND QFLSKMKPTA
YFINTSRGQI VDEDALCRAL REKRIAGAAL DTFKVEPLPL DSPLREFGNL ILTPHLIGHT
LENQLAFADI GVENITRILK GELPLYCVNP QTEQRWRERL ATLA
|
|---|
| |