Gene Dhaf_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3399 
Symbol 
ID7260417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3635236 
End bp3636495 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content52% 
IMG OID643563322 
ProductHI0933 family protein 
Protein accessionYP_002459853 
Protein GI219669418 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000862547 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG AACGCGTTAT TGTAATCGGA GCAGGAGCAG CCGGACTTAT GGCTGCAGGC 
CAAGCCGCCC TGAAGGGGGC CGACGTGCTG CTCCTGGAAA AGAAAGAACG TCCCGGGCGT
AAAATTGCCA TTTCCGGCAA AGGACGCTGC AATCTGACCA ATGCAGAAAA TGTGGGAGAT
TTTATTCGGA ATTATCCAGG CAACGGACGT TTTCTCCATG GCATCTTAAG AGAATTTGAT
AATGTAAGGC TTTGCGATTT CTTTGCTCAG TATGGTGTTG AGACCAAAAC TGAGCGGGGA
GGGCGGGTGT TTCCTGTCTC GGATGATGCC GAGCAAATCG TTGAGGCCTT GCTCAAGTAT
ATTATGGATG CAGGGGTGGA ACTGGCCACC GGACAGACGG TGGAAGAGAT ACTCCTGGGT
GAAGAGAAGG TCCGGGGTGT GCGTTTAAGC AATGGGAAAG TCCTTGAAGG CAAGTCGGTG
ATCGTCTGTA CGGGAGGGGG GTCTTACCCC GCCACAGGCT CCGCCGGAGA TGGCTACAAG
ATGGCTCAAA AGCTGGGGCA TAAGGTGATT CCCCCACGGC CATCTCTTGT TCCCTTGAGA
ACTTATGAAG ATTGGGTAAA GCAGGTTCAA GGGCTTTCCT TAAGGAATGT GGAAGCCACG
TTGTGGTATG GCGGGAAAAA GCAGCAAACG GAGTTTGGGG AGATGCTTTT TACTCACTTC
GGCGTCTCAG GACCCATCAT TCTCACCTTA AGCCGTTGGG CAGGCGAAGC GTTGGCCGGC
GGGGAGAAGG TTCGCTTGAC CCTTAACCTT AAGCCGGCCT TAACTGCGGA GCAATTGGAT
CAGAGAGTGC AGAGAGATTT CAAGAAATAC TTGAATAAGC AATTCAAGAA CTCACTGGAT
GAGCTGCTTC CCAAAAGCTT AATACCCCTG GTGATCCAAT GGTCCCAAAT TCCCCCGGAG
AAAGCGGTCA ATAGCATCAA TAAAGAAGAA AGAAAACACC TGGTCCATGT GTTGCAGGAA
CTTCCTTTAA CTATCAAAGA GACTCTGCCT TTAGCGGCAG CTATCGTGAC CGCCGGAGGA
GTGGATGTCA AAGAAATCGA TCCCAAGACC ATGGCTTCCA AAAAGATTAA GGGTCTTTAT
TGGGCCGGAG AAGTAGTGGA TGTGGACGGA GTGACGGGAG GATATAACCT GCAGGCAGCC
TTTGCCATGG GGTACCGGGC CGGCCGGGGG GCGGGGGAAT ACGCCTCAGT CGATGACTAG
 
Protein sequence
MKKERVIVIG AGAAGLMAAG QAALKGADVL LLEKKERPGR KIAISGKGRC NLTNAENVGD 
FIRNYPGNGR FLHGILREFD NVRLCDFFAQ YGVETKTERG GRVFPVSDDA EQIVEALLKY
IMDAGVELAT GQTVEEILLG EEKVRGVRLS NGKVLEGKSV IVCTGGGSYP ATGSAGDGYK
MAQKLGHKVI PPRPSLVPLR TYEDWVKQVQ GLSLRNVEAT LWYGGKKQQT EFGEMLFTHF
GVSGPIILTL SRWAGEALAG GEKVRLTLNL KPALTAEQLD QRVQRDFKKY LNKQFKNSLD
ELLPKSLIPL VIQWSQIPPE KAVNSINKEE RKHLVHVLQE LPLTIKETLP LAAAIVTAGG
VDVKEIDPKT MASKKIKGLY WAGEVVDVDG VTGGYNLQAA FAMGYRAGRG AGEYASVDD