Gene Dhaf_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3397 
Symbol 
ID7260415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3633024 
End bp3634193 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content50% 
IMG OID643563320 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_002459851 
Protein GI219669416 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0458674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTACGC AGAAAAAGAC CATCAATTTT TTGCAGGAGT TTTCGATTCC ATTAATTCTA 
GGTGTCCTTA TCGCACTTGT TTGGGCTAAT TTAGCGCCGG AAAACTACCA TCATTTTGTC
CACAATGAAA TTATCGGCCA TATATCTCTT CATTTCTTTG TCAACGATAT CTTTATGGTG
TTCTTTTTTG CCATGGCAGC GATAGAAATT ACTCAAAGCC TGCTGCCCGG AGGAAGCTTA
AATCCCCTTA AAAGGGCGAT CAATCCTCTG ATGGCCACCC TTGGCGGAGT TCTGGGCCCA
GCCCTTGTCT TTCTTGGTTT AAATGCCCTG ATCGGGAGTC CTGAGTTTGC CAGAGGCTGG
GGTATCCCTA CAGCCACCGA TATTGCTTTA GCCTGGCTGG TGGCAAGGGT AGTGTTTGGA
GCTCAGCATG CTGCGGTCTC TTTCTTGCTG CTTCTGGCTA TTGTCGATGA TGGCATCGGT
CTGATGATTA TTGCCTTCTT CTACCCTGAT CCCGCCAACC CGGTGGCACC CCTCTGGTTA
TTGCTCACTG TGGCGGGTAT GCTGGTTGCT TATCTGCTCA GACGCAAAAA TGTTCAGAGC
TACTGGCCTT ATATCATCTT GGGGGGAATT CTGAGCTGGG CCGGCCTTTA TCTGGCCCAT
ATTCACCCGG CTTTGGCCCT GGTGTTTATC GTTCCCTTCC TGCCCCATCC TCCCCGGGAG
GAATTCGGCT TATTCGAAGA TGATCCCCAG GATCACTCCA CTCTGAAAAC ATTTGAGCAC
GAATGGAAAA TATTCGTGGA CTTCGGCCTG CTTTTATTTG GATTAACCAA TGCGGGGGTG
GAATTCTCAG AAATCAACAC TCTCACCTGG CTGGTTCTCA TTGCTCTCGT CGGCGGAAAA
ACCATCGGCA TATTCCTCAT GGGTTCTTTG GCTACAGTCA TCGGCTTTCC CTTCCCCAAA
GGCATGGGGT ATAAAGAGCT CCTGGTGGCC GGCGTGATAG CGGCTATGGG ACTTACCGTT
GCCCTATTCG TCTCGGGTGT AGCCTTTATT GATCCGGGTC TGCAGGGAGC AGCAAAGATG
GGAGCACTGT TCAGTGCAGT TGCGGCGGTC ATTGCTTTCG CCTTGGGTAA AGTGCTCGGA
ATCAAGAAAG TCAAAGACAC TCAGGCTTAA
 
Protein sequence
MSTQKKTINF LQEFSIPLIL GVLIALVWAN LAPENYHHFV HNEIIGHISL HFFVNDIFMV 
FFFAMAAIEI TQSLLPGGSL NPLKRAINPL MATLGGVLGP ALVFLGLNAL IGSPEFARGW
GIPTATDIAL AWLVARVVFG AQHAAVSFLL LLAIVDDGIG LMIIAFFYPD PANPVAPLWL
LLTVAGMLVA YLLRRKNVQS YWPYIILGGI LSWAGLYLAH IHPALALVFI VPFLPHPPRE
EFGLFEDDPQ DHSTLKTFEH EWKIFVDFGL LLFGLTNAGV EFSEINTLTW LVLIALVGGK
TIGIFLMGSL ATVIGFPFPK GMGYKELLVA GVIAAMGLTV ALFVSGVAFI DPGLQGAAKM
GALFSAVAAV IAFALGKVLG IKKVKDTQA