Gene Dhaf_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3393 
Symbol 
ID7260411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3629851 
End bp3630762 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content53% 
IMG OID643563316 
ProductPrephenate dehydrogenase 
Protein accessionYP_002459847 
Protein GI219669412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG GTCGGGAAAT TATTTTGTCC GGAGGATGGA CAGGGCAAAG GCAGCCCCGT 
GCTTGTGTCA TCGGCCTCGG CCTGATTGGA GGGTCCTGGG CAGGTGCGCT GGCAGGGCAG
GGGTGGTCTG TCTGCGCTGT AGAATGCCAT GAAGAAAGTC TGAAAGAAGC AAAAGTTCGG
GAATGGATCA AAGAGGGCTG GCAGGAGATA CCGGAGAGCC TTGATGTGGA TCTGGTTATC
CTGGCGACGC CTGTTTCCCT GCTGGCAGAA AGTTTTGCCC GGGCCGTCGG TTGTGTGTCT
GCCGGCAGCC TTATCACCGA TGTAGGAAGT GTAAAAATAG ACATATGCCG GGCAGCCAAT
CAGATGAATT CGGTCTATTT TATTGGGGGC CACCCCATGA CAGGATCAGA GCAGCAGGGA
TTTCAAGCGG CTAAACCGAA TTTATTCCAG GGCTATCCTT ATGTGATTAC TCCTCCCCCC
TCTTGTCCTC AGGAGATGGT GGAAAAGTTT TCTCAATTGG TCCAGAGGCT TGGGGCAAGA
ATCGTCTCGC GGGAAGCTGA GGATCACGAT GATGAAGTGG CCTTGATCAG TCACCTGCCT
CATGTGCTGT CCCTTGCCCT GGCCTTAACT GCAGCAGAAG GGAATTTAAG AGGGAAACCC
CTTGAAATAG CCGGTCGGAG CTTCCGGGAA ATTACCCGGC TGGTGGATAG TTCGCCGGAA
ATGTGGCGGG ATATATTGTT TTCCAACGCC TCGGCAATTC TCCGCTCCCT GGATATCTGG
GAAGAAAAGG TTAAGGAGAT TCGGGAGATC ATCGCGGGCG CTGATGGCGA AGAGATGCTT
AAAGTGTTTG CGAGGGCTCA AGGGGCCAGG AGTCAAATGC TGAACCGGAG GGAATCAGAT
GCAAATAAAT AA
 
Protein sequence
MEKGREIILS GGWTGQRQPR ACVIGLGLIG GSWAGALAGQ GWSVCAVECH EESLKEAKVR 
EWIKEGWQEI PESLDVDLVI LATPVSLLAE SFARAVGCVS AGSLITDVGS VKIDICRAAN
QMNSVYFIGG HPMTGSEQQG FQAAKPNLFQ GYPYVITPPP SCPQEMVEKF SQLVQRLGAR
IVSREAEDHD DEVALISHLP HVLSLALALT AAEGNLRGKP LEIAGRSFRE ITRLVDSSPE
MWRDILFSNA SAILRSLDIW EEKVKEIREI IAGADGEEML KVFARAQGAR SQMLNRRESD
ANK