| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3387 |
|---|
| Symbol | |
|---|
| ID | 7260405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3621606 |
|---|
| End bp | 3622304 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643563310 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_002459841 |
|---|
| Protein GI | 219669406 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000000123016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAA ATCTTCAGAT AGCAATTGAC GGCCCTGCCG GTGCGGGAAA AAGTACAATT
GCCAAGGCAA TCGCCAGGCA GTTGGGATTT TTTTATGTCG ATACAGGAGC AATGTACAGA
GCCATAGCTT ACAAAGCTTT GCGCCTGAAT ATAGCGCTTA CACAGGAAGA GGAGATTGCG
GGCATGGCCC GGCAAACGGA GATCACTCTG GAACACTCAG CGGCAAGAAG GGTGTTTTGT
GATGGCCTGG ATGTTACGGA AGCCATACGC AGCCCTGAAG TATCCCGTTC GGTTTCCATC
ATTGCCGCTT ACCCCGAAGT CAGAGAACGC TTGGTAGAAC TCCAGCGGCA GGAAGCCGGG
CAGGGAGGGG TGGTCATGGA CGGCAGGGAT ATCGGAACCT ATGTCCTGCC TGATGCCGAC
CTCAAAATCT TCCTGACCGC TTCATCTGAA GAAAGGGCCC GGCGGCGTTG GCTGGAACTT
CAGCGAGCCG GAAAAGAGCT GTCCCTGGCT GAGGTGCAAA GGGACATGGA TGCCCGGGAT
CACTATGATC AGCAAAGGGC TGTCTCTCCT TTAATTCCGG CGGCGGATGC GATTTTGCTG
GATACGACCG GTTTGCAGAT CGAGGAGATT GTTGACCGTA TCCTCAGCTT ATTCAATGAT
AAAGTGGAGA CAGGGTACGT AAGGAGTCAG AACCAATGA
|
|---|
| Protein sequence | MKKNLQIAID GPAGAGKSTI AKAIARQLGF FYVDTGAMYR AIAYKALRLN IALTQEEEIA
GMARQTEITL EHSAARRVFC DGLDVTEAIR SPEVSRSVSI IAAYPEVRER LVELQRQEAG
QGGVVMDGRD IGTYVLPDAD LKIFLTASSE ERARRRWLEL QRAGKELSLA EVQRDMDARD
HYDQQRAVSP LIPAADAILL DTTGLQIEEI VDRILSLFND KVETGYVRSQ NQ
|
|---|
| |