Gene Dhaf_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3369 
Symbol 
ID7260386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3604383 
End bp3605105 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content50% 
IMG OID643563291 
ProductNi/Fe-hydrogenase, b-type cytochrome subunit 
Protein accessionYP_002459823 
Protein GI219669388 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00901378 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAG CCAAAAACTA TCAACCTGAT GGGAGTCCCT CAAAACTCCG CTCTCCTATC 
TACGTGTGGC AATGGCCGGT CAGATTCTTC CACTGGATCA ATGCCGCCGC CATCGTGGTT
CTGTTTATAA CCGGGCTGTA TATTGGCAAT CCCATCCTGA GCTCTCCCGG GGAAGCGGTG
GGAAATTTCT TCATGGGCAA TATGCGCTAT TGGCATGGGA TAACTGCTTA TATCTTTACA
GCCAATCTTC TCTTCCGCCT GTATTGGTTT GTGGTCGGCA ATGAGTTCGC CAAGCTGCGG
TTTTGGCGCA AAGAGTTCTG GCAGGATGCC GTAGCCACTC TAAAATACTA TCTCTTTTTA
ACCCGTGAAC ATACAACCCA TGTCGGGCAT AATTCCATGG CTCAATTGAT GTATCTTGTC
TTCATCTGGG TGGCCAGTCT GGTCATGATC CTGACCGGTT TTGCCATGAG AGCCACCGCC
ACGCCCAGTG GAGCTCTCGG TCTTTTTTCC TGGCTGATCC CGGCGATAGG CAGTGAAAGT
CAAGTCAGAA TGATCCATCA CCTGTTTGCC TGGGGCTATG CCGCCTTTCT CCTCGGCCAT
CTCTATATGG TCTTTCGTCA GGATATTTTG GATGATGATG GTACTGTCTC CTCCATGATC
AGCGGCTATA AATATGAACT CCCCGAAACC GTCAAGCCGG AGGATCATCC CCCTTCTCCC
TGA
 
Protein sequence
MAEAKNYQPD GSPSKLRSPI YVWQWPVRFF HWINAAAIVV LFITGLYIGN PILSSPGEAV 
GNFFMGNMRY WHGITAYIFT ANLLFRLYWF VVGNEFAKLR FWRKEFWQDA VATLKYYLFL
TREHTTHVGH NSMAQLMYLV FIWVASLVMI LTGFAMRATA TPSGALGLFS WLIPAIGSES
QVRMIHHLFA WGYAAFLLGH LYMVFRQDIL DDDGTVSSMI SGYKYELPET VKPEDHPPSP