| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3348 |
|---|
| Symbol | |
|---|
| ID | 7260365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3581675 |
|---|
| End bp | 3582967 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643563270 |
|---|
| Product | glutamate-1-semialdehyde aminotransferase |
|---|
| Protein accession | YP_002459802 |
|---|
| Protein GI | 219669367 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGGTTTC AGGATCAACG AAGTAAAGAA GCTTTTGCCC GGGCCAATGG CGTCCTTCCC
GGCGGAGTCA ACTCTCCGGT AAGGGCTTTT AAATCCGTAG GGCGGGAGCC CATATTTATC
GCCAAAGGAC AGGGGGCAAG ACTATGGGAT ATTGACGGCA ATTCCTATCT GGATTACGTT
TTGTCCTGGG GACCGCTGAT TCTTGGTCAT GCCCACCCGG TGGTGGTGGG GGCCATTAAA
GCGGCCGCGG AGCGGGGAAC CAGCTATGGA GCACCCACTG AGATTGAAAC GGAATGCGCT
GAAGAAGTGA TTAAAGCCTT CCCCTCCATG GAAATGGTCC GCATGGTCAG CTCCGGAACC
GAGGCCACCA TGAGCGCCTT GCGCTTAGCC CGGGGAGTGA CAGGCCGCAA CAAAATTATT
AAGTTTGAAG GGTGCTATCA CGGTCATGGT GATTCCTTGC TGATCAAAGC GGGCAGCGGG
GCTTTGACCT TTGGCGTCCC CACCTCTCCG GGTGTACCCT CTTCAGTAGC TTCACAAACT
ATTGTAGCTC AATATAACGA CCTGGAAGGT TTAAAAGAGA TTTTTAAGGA ATGCGGGGAA
GACATTGCCG CAGTGATCCT GGAGCCGGTG ACCGGGAATA TGGGCGTTGT TTTACCTCAA
CCCGGGTTTT TGGCGGGCTT GCGGACCCTG ACTCAGGACT ATGGCAGCCT GCTGATCTTT
GATGAAGTGA TGACAGGCTT CCGGGTGAGT TATGGAGGGG CACAGGGCCG CTATCAAATC
GATCCGGATT TGACCTGCCT GGGTAAAGTG ATTGGGGGGG GGCTGCCTGT GGCAGCCTAT
GGCGGCAAAA GGAAGTACAT GGAGCAGGTA GCTCCCAGCG GGCCAATTTA TCAAGCCGGC
ACCTTATCCG GTAATCCTTT GGCCATGGCG GCGGGGCTGG CCACTTTAAA GCTCTTGCAG
CAGGAGGGGG TCTATGAGGG ACTGGAGAAG AAAACCGCCC GTTTAGCTGA GGGCTTGCAG
TCCATCGCTC AGGAATTAGG GTTCCCCATC TGGGTCAATT CCGTGGGAGC TATGTTCTCC
GCCTTCTTTA CCGATCAACC TGTAATTGAC TTTAAAAGCG CCTGCTCTTC CGATGTGGAG
CGTTTTGGTT CCTTCTTCAG AGGCATGCTG GAGCGGGGGA TCTACTTAGC GCCCAGCCAA
TATGAAGCGG TATTCCTTTC TGCCGCCCAT ACGGATGCAG ATATTGACTA TACCTTGGAA
CAGGCCAGGG ATGTCCTTAA ATCCTTGGGC TAA
|
|---|
| Protein sequence | MGFQDQRSKE AFARANGVLP GGVNSPVRAF KSVGREPIFI AKGQGARLWD IDGNSYLDYV
LSWGPLILGH AHPVVVGAIK AAAERGTSYG APTEIETECA EEVIKAFPSM EMVRMVSSGT
EATMSALRLA RGVTGRNKII KFEGCYHGHG DSLLIKAGSG ALTFGVPTSP GVPSSVASQT
IVAQYNDLEG LKEIFKECGE DIAAVILEPV TGNMGVVLPQ PGFLAGLRTL TQDYGSLLIF
DEVMTGFRVS YGGAQGRYQI DPDLTCLGKV IGGGLPVAAY GGKRKYMEQV APSGPIYQAG
TLSGNPLAMA AGLATLKLLQ QEGVYEGLEK KTARLAEGLQ SIAQELGFPI WVNSVGAMFS
AFFTDQPVID FKSACSSDVE RFGSFFRGML ERGIYLAPSQ YEAVFLSAAH TDADIDYTLE
QARDVLKSLG
|
|---|
| |