Gene Dhaf_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3307 
Symbol 
ID7260323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3538412 
End bp3541201 
Gene Length2790 bp 
Protein Length929 aa 
Translation table11 
GC content43% 
IMG OID643563228 
Producthypothetical protein 
Protein accessionYP_002459761 
Protein GI219669326 
COG category[T] Signal transduction mechanisms 
COG ID[COG5635] Predicted NTPase (NACHT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAT ATATAGTCAA GGTACGTTCT TATCTTAGAG AAGAGTGTAT TGAATACGGA 
ACCGGGATCA TGATCGGGAG AAATCTCGTG CTGACTCCCA GGCATGTGAC CTGTGGAGAG
CGCCATACGG TGTGGGTCGG TGGCAAAGAA GAAGAGTCCT GCGTCGTAAA TGAGAATAAT
GTGGCAGTAG TGCTGGAGAT CGGCAATTCC GATGATAGCT ACTGTATAGC TGATATTTTT
TCCGATGATG AGGTCTTGGA TGAAGAATCC AGATGGTCGG TCAGTGGGTT TATTACATCC
CAGCAATGTG AGCATCATGT GCGGGGGACC GGGATCATCA TTTCACCGGT AAAGGATGAG
GAATGGGATT ATCATCTGGC AGCAATTACG GCTGGAATAG CGGACAATTA TCAGGGATTG
TCCGGCTCTC CCGTATTCTG CGATCACAGA ATCGTCGGCA TCCTGCAAAT GCAGGCGTAT
AATAGCAGCG GCGCATTGGG CGTACGCATG TCATCGGTGG AGATGTTTCA GGACTTGCTG
GCGAAGGAAA ACTTCAAGCC TAATGCATAT CACATGCTGC TGAAAGAGGC CTGTGTTCAA
TATACGAGAA GCCAGATTGA TAAAAACGTA AAAAGCAAAA AGTATATTGC AGACATATTT
GTGGAAGAAG GCGACTATAA AGAAAACCTC CGATATTTTG CAGACCCTAT GTTGTTTTTG
AAGAAGGCGA TCCGTGATGC GAAGATGCTT GATTTTAAAA ATGTTAATTT TTATCTTGGA
AAGCAAGGTA AACAGGAAAT TGATTTTTCC GATCTGACTG AAAACTTTTC AGTGACGGAA
TTGGAACCAT TACATAGTTG CCTGGGGGAC CGGGTTTCAG ATGGGATTTC CTTGTTGGCG
GAATTAGATA AATATTTCTA CTCTGATACT TCCAGTCTGG AGGAGAGTTA TGATCTCAGA
CAGAACAGTC TCAATAATTC CGTTAAATAC TACTTATCTG ACATAAAAGA CAATATCGAC
TTTATAGAAA AGAAATATAT TCTGCTAACC AAAGACGCCG GTCAGGGCAA AACCAACTTC
GTATGTGACT TCACAGCGAA TTTTCTGATG AGAAAAGGCT ATTGCGCGTT ATATTTTAAT
GCCTATGATT TCAGGGAAAA TCCAATAGCG CTTCTCAAGC AAAAGCTGTC GCTGGACGGG
GTGTATTCGT TCTCTTATGG GAATAAAATT CTCCGCCGGG AATGGAATCG TACCAAGAAG
CCCCTCGTCG TCATCATCGA TGGTTTAAAC GAGAATTCGC TGGTGAAGAA CTTTGGCCAG
TGCATACGGG ATTTTCTTGA GGAATGTCAG GCCTACCCAT ATATCAAAGT GATCATGACC
ACCCGGAACG AGTTCCTGAA GGAGCGGTTT GAGGTGATCG AGGAAGGAAC GTATTCAAGG
GCATATAAAC ATATCGATAT GTGGCAGAGG AGCGACGACT TCAAGGGGCG GATCTTCCGA
GGGTACCTGA ACTTTTTCGG GATCACGATC AGAGAGAATA CATTAACAAA TCGATTCTAT
GATGCCTTAA CGAGTGATGT GCTGCTGCTG CGATTTTTCT GCGAAGCAAA TGAGGGCAAG
AAGCAAATCT ACGTCTATGA TGTTTACAAA TATGATGTAT TCCGGCAGTA TTTGAATCTA
AAATCACAGG AATATCAAAA GGATCAGCCG GTCTTAAATC CTCAGGATTC TTTGTATACC
TTGCTTGATA AAATTTCGGA ATATATGATT CGTAAAAAAA CGTTCTTTAA TGTCCCCTCC
GGAATTTTCA ACAAATCTGA GCAAGAGCTG CTCTATCAAA TGCTGGATAA CGAGGTGATA
TTCAAGGACG AGCAGATATT GAAAACAGGT ATGTTGATGA AAAATACTAT AGTGATCAGT
TTTACATTTG ATGAATTCCG GGACTTCTGT ATTACAAACT ATATTTTGAC CCATCTTGCG
GAGCAGGATG CCTTTCTATC GTTCTGGGAT CAGATGAATG AAGAAAATCT GACAATCAGG
GAAGGCGTTC AAAAATACAT TTTCTATTTG GCGCGAACTG AATCGCAGGA GGATTTATTG
CCGATCATCG AAGCTCTTCC TGAATACGAA AATCTCTACT GGCTCTATAT ATGGGGGCTG
GAGGATCGTC ATTTTACCGC TCATGATAAG GAAGCCTGGA GGATGCAACT TGTGGCGAAT
GGGCCTCATG CGGAAAAAGT TGTTCATGAT CTGCTTGGCA AATATGATTG TGAGTTTTTT
GGTAAGATTA ATATCCGTTT GCTGTTCGAG GCGCTGGATG TGCTTGCCGA AAAAATAGAC
TTGTATGATG CTTTTATTAA AAGGATGTTT GGTGTCTACC GTGAGAAGAA AGGTGCTTAT
AACAATCCTC GGCCAGAGTC TGTATGGCCT TTTAACAGGA TGATCCAGCG CATTGCGGAA
GACGTAAATG ATGATGCTTG GAATGTGCGC CATTCTGAGT GGTATCGACT GAGCATTTAT
TTACTTGAAC TGGAGAACCG GGGCGCGTTG GATTTATGGT GCAAGCTCTA TGAAGTGTCA
CCGGAAGTGG CTGTGCGCAT TCTGGAAGAA ATGAACCGAC ACCAAAGCAG CTTGATTTTA
GGCAATGTTA AGGAGATTCT GCAACATCTT GAAAAATTCA GGAAAGGTGA GCCATGGGAT
CAGAGAATAG AACGGCTGGC TCAGGAAAAC AGCTTTTGCC GGGATATACC TGGTGGTAGG
GAGCTGTTTT CAAAATTGCT GTTCGATTAA
 
Protein sequence
MEKYIVKVRS YLREECIEYG TGIMIGRNLV LTPRHVTCGE RHTVWVGGKE EESCVVNENN 
VAVVLEIGNS DDSYCIADIF SDDEVLDEES RWSVSGFITS QQCEHHVRGT GIIISPVKDE
EWDYHLAAIT AGIADNYQGL SGSPVFCDHR IVGILQMQAY NSSGALGVRM SSVEMFQDLL
AKENFKPNAY HMLLKEACVQ YTRSQIDKNV KSKKYIADIF VEEGDYKENL RYFADPMLFL
KKAIRDAKML DFKNVNFYLG KQGKQEIDFS DLTENFSVTE LEPLHSCLGD RVSDGISLLA
ELDKYFYSDT SSLEESYDLR QNSLNNSVKY YLSDIKDNID FIEKKYILLT KDAGQGKTNF
VCDFTANFLM RKGYCALYFN AYDFRENPIA LLKQKLSLDG VYSFSYGNKI LRREWNRTKK
PLVVIIDGLN ENSLVKNFGQ CIRDFLEECQ AYPYIKVIMT TRNEFLKERF EVIEEGTYSR
AYKHIDMWQR SDDFKGRIFR GYLNFFGITI RENTLTNRFY DALTSDVLLL RFFCEANEGK
KQIYVYDVYK YDVFRQYLNL KSQEYQKDQP VLNPQDSLYT LLDKISEYMI RKKTFFNVPS
GIFNKSEQEL LYQMLDNEVI FKDEQILKTG MLMKNTIVIS FTFDEFRDFC ITNYILTHLA
EQDAFLSFWD QMNEENLTIR EGVQKYIFYL ARTESQEDLL PIIEALPEYE NLYWLYIWGL
EDRHFTAHDK EAWRMQLVAN GPHAEKVVHD LLGKYDCEFF GKINIRLLFE ALDVLAEKID
LYDAFIKRMF GVYREKKGAY NNPRPESVWP FNRMIQRIAE DVNDDAWNVR HSEWYRLSIY
LLELENRGAL DLWCKLYEVS PEVAVRILEE MNRHQSSLIL GNVKEILQHL EKFRKGEPWD
QRIERLAQEN SFCRDIPGGR ELFSKLLFD