| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3290 |
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| Symbol | |
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| ID | 7260306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3519999 |
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| End bp | 3521420 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643563211 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002459744 |
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| Protein GI | 219669309 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000228847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAATTAC AGAGTATTGA AAAGAGGGTA TCTTCCGGTC ATAGCCCTTC CTGTGCAGAG
ATATTGCTGT CTACCATTCA AGAGATGAAT CGTGAGGAGA ATCTCTTGAA AGCATTAGAT
CTCTTTACTC AGCGAAGCTT GGTGTTGTTT GACTGTGATG TAGCTGCAAT CTACCTTTTG
GAGCAAGGGA AATACAAGCC TTTCTCTGTT AGCTTTCGTG ATGATAAGGA CAGGGAAACG
CTGATGTTAA GGGAATTTCC TCAGGATTTC CGGGAAATTG GTACTGAAGT CGTCGAAACG
GATGAGGAAT GGGTTTTGGC ATTAAGCCAT TTTGGCAAAA CCTTAGGTGC TTATGTTCTC
AAAGGCAGGC GATCTCAGTG CAGGGATGAG GGGTCAGCAG TCTTTGTAAA GCAAGTCATT
TCGATTATAT CTTCTTTTAT ATTCGAGAGA ATATTGAAAA TCGACTCTCT GAGCAGGGAA
CAAGCCTTAA CCTTATTATT GCGGGGAACG GAGATTCTTG TTCGTGCTGA CTCTGAGGAG
CAGCTTTTAT CGGAAGCCGG AGAAATGGCC ATGGAAATTC TGTTTTTGCC CGGGGGATTT
TTTCTCCTGG AGGGGGCCGG AGGGACTTGG GAAATCCGTT CACCCTTTGG GCGGCTGAAA
CAGGAGATGG AGTGGGATTG GCGAACTTGG GTCAGGCAAT ACATCTCTAA AGAAGAATGT
TGTCTGAGAA GTGCTAAGGT TCACTTTTTT GATATTGAAA ATAATCCTTT TAAATGGGAA
CGTGTGTGGA TACATCCTCT CCAGACCCAT AGCGGGGTGG TCGGCGAGCT GTGGCTGATG
AATGCCGGTA AGTACCTTAA TGATCAGGAG CAGGAGATAC TGACTGCCTT TATCCGGGTG
GTTGGGGTTG CTTTAGAGAC CATTCGCCAG CGTGAGGAGC TGGCCCGCTT GGCCAATACG
GATCGTTTGA CAGGAATACT GAACCGCCAG GGGTTCGAGC AGCGTGTTCG GGAAGAAATA
GCCAGTACCT TAAGGAGAGA CTCACGTTTT CTGTTCCTGG TTCTTGATTT GGATCGATTT
AAACAGCTCA ATGATACTCT GGGCCATCCC ATGGGTGACC GGGCCCTGAA AGAAATTGCT
CAGAACCTGC GCTGCGCGGT ACGGGAGCAG GATATTGTGG CCCGGACCGG TGGTGATGAA
TTTACAGTGG TGCTGACGGA CATCGCCCTG AATGAAGAGT CCCTGACTGT GATTGAACGG
ATGAGAAAGA GCATGCATCT GGAAGAATAT AATTTAGGAG TCAGTATTGG AGTCGCAGAA
TTTCCAACGG AAGGCCGTAC CTATGATGAA TTGTACCGTT TAGCAGACCA AAGGCTTTAT
AGAGGCAAGA ATTCAGGGAA AGGAAATATC ATAGCGGACT AA
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| Protein sequence | MQLQSIEKRV SSGHSPSCAE ILLSTIQEMN REENLLKALD LFTQRSLVLF DCDVAAIYLL
EQGKYKPFSV SFRDDKDRET LMLREFPQDF REIGTEVVET DEEWVLALSH FGKTLGAYVL
KGRRSQCRDE GSAVFVKQVI SIISSFIFER ILKIDSLSRE QALTLLLRGT EILVRADSEE
QLLSEAGEMA MEILFLPGGF FLLEGAGGTW EIRSPFGRLK QEMEWDWRTW VRQYISKEEC
CLRSAKVHFF DIENNPFKWE RVWIHPLQTH SGVVGELWLM NAGKYLNDQE QEILTAFIRV
VGVALETIRQ REELARLANT DRLTGILNRQ GFEQRVREEI ASTLRRDSRF LFLVLDLDRF
KQLNDTLGHP MGDRALKEIA QNLRCAVREQ DIVARTGGDE FTVVLTDIAL NEESLTVIER
MRKSMHLEEY NLGVSIGVAE FPTEGRTYDE LYRLADQRLY RGKNSGKGNI IAD
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