| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3284 |
|---|
| Symbol | |
|---|
| ID | 7260300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3513664 |
|---|
| End bp | 3515043 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643563205 |
|---|
| Product | protein of unknown function DUF815 |
|---|
| Protein accession | YP_002459738 |
|---|
| Protein GI | 219669303 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000204054 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAGGA CGAAAATTAC CCGGTTATCC CTTCTTTTTG ACGGAATGGT TGTTTTCCGA
GGCATCATAG GGGATCCGGT GGCAGTTTCT TTCCAAAAAC TGCTCCAGGG GATAGGGAGC
AGGGAGTTTG ATCTGATGGC AATTTATAAA GATTATCATC ATTTCTGCTC CTTGGCGACT
CAGGCTCATT GGCCTGATTA TCTTTGGGAG CGTATGCTTC AGGATGACAA TGAGCTGGCC
AGGCAAACGG CTCAACAGGG AAAGGACCGG GTTCCCGCCG GGCTGCGCCG ACTGGCCGGG
CGGGAGCTGC TCTATTTGCG GGAGCTTGCC GGGCTGAAGG CGGAAGATAT TAAAGGGGCT
GTCAAGGCAC GGTGTGCAGA GCAAGGGGCG GAAGAACCGG GCCTCTGGCT GGAGGAACCA
TTGAGCCCGG AAAGCTGGCC TGGTTGGCTG AGTCTTCCGG ATATGGATAG GGAAAAAGAA
ACTTATGCAA AAGAAGAGAA TCGGGCTGAA AACTATCTCC TTTCCTCTCA GAAAAAGTTG
AAGCAGAGTC TGCTTCGGGG AAGGTCAGAG GAAATGGTGG ATGCGCTGCT TGCTTATTAT
CAAACCATGG GTACCGGATT GTTCGGCCGG TGCATGGCTC TCAAATGGCG GGGCCGTGCG
GAAAGGCTGG AAGGGGTACA CCCTGAGCCC ATGCGCATCA GCAAGTTGAT TAATCAGGAA
CGGGAGCAGG GAATCATCCT CCAGAATACG GAATTTTTCC TGAAAGGCCT TCCGGCTAAT
AATGTGATTC TCTATGGCAA CCGTGGGACT GGGAAATCTT CCTTGGTGAA AGCTTTAGTG
CAGGAATATG GTGAACAGGG ACTGCGCCTG GTGGAATTAT CGAAAACAGA CTTGCATGAC
TACCCCAAGA TTATTCGGCT CCTGGCCAAG CAGCCTTTGA AGTTCATTCT GTTTATTGAC
GATCTTTCTT TTGAAGACAC GGAAAGTGAT TATAAGAATC TGAAGACCCT GCTGGAGGGA
GGGCTGGAAG GGAAGCCCCA AAACGTGCTG ATCTATGCCA CCTCCAACCG GCGTCATTTG
ATCAGAGAAA CCTTCGGCGA ACGGCAAGTC GAGGAAGTCC ACCGGCGGGA CAACATGGAG
GAAAAATTGT CCTTATCCGA CCGCTTCGGC ATTACGGTCA CCTTCCCCAC ACCGGACCAG
GAAGGCTATC TGAAGATTGT GGAGGAGTTA GCAACTCAGG AAGGGCTGAC ACTTCCCAAG
GAGGAGTTAA GACAGCAGGC GCTGCGCTGG GTGATGAATC ATAATGCCCG CTCAGGGAGA
ACCGCCCGTC AGTTTGTGGA TTTTCTGGTG GCCAGGGAAG GGTTGGCCGC TCAGCAATAG
|
|---|
| Protein sequence | MNRTKITRLS LLFDGMVVFR GIIGDPVAVS FQKLLQGIGS REFDLMAIYK DYHHFCSLAT
QAHWPDYLWE RMLQDDNELA RQTAQQGKDR VPAGLRRLAG RELLYLRELA GLKAEDIKGA
VKARCAEQGA EEPGLWLEEP LSPESWPGWL SLPDMDREKE TYAKEENRAE NYLLSSQKKL
KQSLLRGRSE EMVDALLAYY QTMGTGLFGR CMALKWRGRA ERLEGVHPEP MRISKLINQE
REQGIILQNT EFFLKGLPAN NVILYGNRGT GKSSLVKALV QEYGEQGLRL VELSKTDLHD
YPKIIRLLAK QPLKFILFID DLSFEDTESD YKNLKTLLEG GLEGKPQNVL IYATSNRRHL
IRETFGERQV EEVHRRDNME EKLSLSDRFG ITVTFPTPDQ EGYLKIVEEL ATQEGLTLPK
EELRQQALRW VMNHNARSGR TARQFVDFLV AREGLAAQQ
|
|---|
| |