| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3283 |
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| Symbol | |
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| ID | 7260299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3512426 |
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| End bp | 3513532 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643563204 |
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| Product | spore germination protein |
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| Protein accession | YP_002459737 |
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| Protein GI | 219669302 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00764242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA AAATCTCAAG CCGTCAATCC TTTTGTACTT ATTTCGTGAT TGTTTCCCTA
TCTATAGGCA TGCCCAATCT GATCATAAGA GATTTGGAGC AGGATTTTTG GCAGGCCCTC
CTGGTGGCTA TAGTTATAGA AACAATGCTG GGTTTTTTCT TATATAAAAT GGGGAGGACC
TATGCCAATC AGACGATTTT TCAATACAGT GAGAAAATCC TCGGCAAAAT CTTAGGCAAG
ATAAGCGTTG GCATGTTCAG CCTTTACTTT ATTAGTGTAG CCATCACCCT TACCCAAAGT
CTTATGGAAT TCTTTGGTTC GATGGCGATG CCGGAAACTC CGCGCTACGT TTTTGCCATT
TTGCTCTTGC TGGTGAGCAC CTATGCCTGC AGTGCCGGGC TGGAGGTGAT TATGCGGCTT
TCTGAGATTG TCGCCCCCTT TGTGCTGGGC TCCTTTCTCT TTATCATGCT GTTTAATATT
GGGAATATGG AGTTTGATAA TTTGCGGCCC ATGTTCCAGC ACAGCCTGGG GGAGATTCTG
AGAGGAGCTA TGCTTCCCAC TGCTTGGTTC GGGATCTGTA TTATTATGGG CGTTTTAATG
GCTTACCATA ATAATCCTAA AGTTATGTAC AAGATAAAGC TTATGGGTGT GGGCCTGGGC
ATTCTGACGA TCACCACCTC CATGTTTTTT GTCATTACGG TGATTGGCGT AGAAATGGGC
TCCAGGCAAT TGTATTCCGT CTATATTCTC GCCCGCCTGG TTGATGTAGG GGATTTTATC
CAAAGAATGG AGGCGTTTCA GATCGTATCC TGGACGGCGG GATCTTTTTT GATTCTGGCT
TTGTTTCACT ATGCCGGCGT GGAAGGCTTA AAACATATTT TTCCGAAAAA ATCCCGCATG
TTTTTGGGGA TCAGCATTGC CGTTATTGTA TTTGTCGTTT CTGTCTTTGT TACGCCCACC
GCCATTGATC GCTCGACATT TTTGAAAAAC ATCCTTGGCG TCTATGGTTT AGTTGTCGAA
ATATGTGGAG TTTCCCTCCT TTTTATCATT TACGTCATAA AACAAAAATT CAAGGCAGTA
AAAAAGAGGT CTTCTAATGA GCAATAA
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| Protein sequence | MNIKISSRQS FCTYFVIVSL SIGMPNLIIR DLEQDFWQAL LVAIVIETML GFFLYKMGRT
YANQTIFQYS EKILGKILGK ISVGMFSLYF ISVAITLTQS LMEFFGSMAM PETPRYVFAI
LLLLVSTYAC SAGLEVIMRL SEIVAPFVLG SFLFIMLFNI GNMEFDNLRP MFQHSLGEIL
RGAMLPTAWF GICIIMGVLM AYHNNPKVMY KIKLMGVGLG ILTITTSMFF VITVIGVEMG
SRQLYSVYIL ARLVDVGDFI QRMEAFQIVS WTAGSFLILA LFHYAGVEGL KHIFPKKSRM
FLGISIAVIV FVVSVFVTPT AIDRSTFLKN ILGVYGLVVE ICGVSLLFII YVIKQKFKAV
KKRSSNEQ
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