Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3283 |
Symbol | |
ID | 7260299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3512426 |
End bp | 3513532 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643563204 |
Product | spore germination protein |
Protein accession | YP_002459737 |
Protein GI | 219669302 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00764242 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAA AAATCTCAAG CCGTCAATCC TTTTGTACTT ATTTCGTGAT TGTTTCCCTA TCTATAGGCA TGCCCAATCT GATCATAAGA GATTTGGAGC AGGATTTTTG GCAGGCCCTC CTGGTGGCTA TAGTTATAGA AACAATGCTG GGTTTTTTCT TATATAAAAT GGGGAGGACC TATGCCAATC AGACGATTTT TCAATACAGT GAGAAAATCC TCGGCAAAAT CTTAGGCAAG ATAAGCGTTG GCATGTTCAG CCTTTACTTT ATTAGTGTAG CCATCACCCT TACCCAAAGT CTTATGGAAT TCTTTGGTTC GATGGCGATG CCGGAAACTC CGCGCTACGT TTTTGCCATT TTGCTCTTGC TGGTGAGCAC CTATGCCTGC AGTGCCGGGC TGGAGGTGAT TATGCGGCTT TCTGAGATTG TCGCCCCCTT TGTGCTGGGC TCCTTTCTCT TTATCATGCT GTTTAATATT GGGAATATGG AGTTTGATAA TTTGCGGCCC ATGTTCCAGC ACAGCCTGGG GGAGATTCTG AGAGGAGCTA TGCTTCCCAC TGCTTGGTTC GGGATCTGTA TTATTATGGG CGTTTTAATG GCTTACCATA ATAATCCTAA AGTTATGTAC AAGATAAAGC TTATGGGTGT GGGCCTGGGC ATTCTGACGA TCACCACCTC CATGTTTTTT GTCATTACGG TGATTGGCGT AGAAATGGGC TCCAGGCAAT TGTATTCCGT CTATATTCTC GCCCGCCTGG TTGATGTAGG GGATTTTATC CAAAGAATGG AGGCGTTTCA GATCGTATCC TGGACGGCGG GATCTTTTTT GATTCTGGCT TTGTTTCACT ATGCCGGCGT GGAAGGCTTA AAACATATTT TTCCGAAAAA ATCCCGCATG TTTTTGGGGA TCAGCATTGC CGTTATTGTA TTTGTCGTTT CTGTCTTTGT TACGCCCACC GCCATTGATC GCTCGACATT TTTGAAAAAC ATCCTTGGCG TCTATGGTTT AGTTGTCGAA ATATGTGGAG TTTCCCTCCT TTTTATCATT TACGTCATAA AACAAAAATT CAAGGCAGTA AAAAAGAGGT CTTCTAATGA GCAATAA
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Protein sequence | MNIKISSRQS FCTYFVIVSL SIGMPNLIIR DLEQDFWQAL LVAIVIETML GFFLYKMGRT YANQTIFQYS EKILGKILGK ISVGMFSLYF ISVAITLTQS LMEFFGSMAM PETPRYVFAI LLLLVSTYAC SAGLEVIMRL SEIVAPFVLG SFLFIMLFNI GNMEFDNLRP MFQHSLGEIL RGAMLPTAWF GICIIMGVLM AYHNNPKVMY KIKLMGVGLG ILTITTSMFF VITVIGVEMG SRQLYSVYIL ARLVDVGDFI QRMEAFQIVS WTAGSFLILA LFHYAGVEGL KHIFPKKSRM FLGISIAVIV FVVSVFVTPT AIDRSTFLKN ILGVYGLVVE ICGVSLLFII YVIKQKFKAV KKRSSNEQ
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