Gene Dhaf_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3280 
Symbol 
ID7260296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3508554 
End bp3509663 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content47% 
IMG OID643563201 
Producthypothetical protein 
Protein accessionYP_002459734 
Protein GI219669299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000000549349 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGAAA ACGATATTCT CGTAGCTGGA GGAGATCCCG GGTTTGGAGC CATTAAGCTG 
GATGCTGGAG ATACTAAAGT GTTGTTTCCG GCGGTTATAT GCAAAGGAAA TGAGCGTATT 
TTTTCTGCTT TGGGTAATGG GAATGTAAGT CGGGGAACCG ATGAAGAAAT GCAGATTGGC 
TCCTTGGATG TCATCGTTAC CAATCACTCC ACGGGAGTTT CCCGTCATTA TTTTATGGGA 
AGTCTTGCCG AGAGTTTGAA CCCCAATGAG GCTCATTATT GTTGGGATGA GGATAAATCC 
ACTGATGAAG AAGCTACGGC ATTGCTCGTG GTAGCCTTGG CTGTTGCGCA AAAAGAACCC 
AAGGCTAATA TATATCTGGG AACCGGCGTC CCGGTTAAAT ACTATGCAGC TTTAAAGGAC 
AAGTATGAAG CTGAACTTAA AGGAACCTGG TCGGTAGCCT TTCGCTCAGG ACCCTTTAAA 
GGCCAGACCC GTCAGCTGAC CATCATTCGT TCCCGGGTCC TTCCCCAAAG CTATGGCGTC 
TTTATTAAAG AGACCTTGAA TGAATACGGA ATCCCCATCA GTCCTAAACT TTTTAATGGC 
TATGTGGTAG TGATCGACCC AGGCTTCAGG ACTACGGATG TGGCGACTTT TTATGATGGC 
GTGATGCTTG ATCCGCCCAA CTCCTTCAGT ATCGAAAAGG GGCTGAAATG GGCCTATACC 
GGTGTGGCTG AGCAATTAAA GGAAATGACG ATTAATCATG CCAACCCTAT CGAAACCGAT 
GATAAGGAAC TGGATAAGGT ATTCCGCGTC AATGAAGGGA TGTATCCCTG GAATAACGGC 
GCCATTAACC TCAACCCTGT GATGCAGGAT ATGCTGGGGC AACTGGGAAC GGATATTTCC 
CGTGAGGTCA AAAAGTCTCT GAAACCCATG CTGGGCAAGA TTCATACGGT TCTTGTGGCA 
GGGAAAGTAG GAGAAATGAT CTTTGAACAC CTCCAATTTG AAAATAAAGT GCTGATCGAG 
AATCCTCAGT TCGGCAATGC CACCGGCTTT AGAATTATGG CTGCCAATTT GGTCAATAAC 
ATAACCAAGA AGGCCAATGC TGCCCCATGA
 
Protein sequence
MFENDILVAG GDPGFGAIKL DAGDTKVLFP AVICKGNERI FSALGNGNVS RGTDEEMQIG 
SLDVIVTNHS TGVSRHYFMG SLAESLNPNE AHYCWDEDKS TDEEATALLV VALAVAQKEP 
KANIYLGTGV PVKYYAALKD KYEAELKGTW SVAFRSGPFK GQTRQLTIIR SRVLPQSYGV 
FIKETLNEYG IPISPKLFNG YVVVIDPGFR TTDVATFYDG VMLDPPNSFS IEKGLKWAYT 
GVAEQLKEMT INHANPIETD DKELDKVFRV NEGMYPWNNG AINLNPVMQD MLGQLGTDIS 
REVKKSLKPM LGKIHTVLVA GKVGEMIFEH LQFENKVLIE NPQFGNATGF RIMAANLVNN 
ITKKANAAP