| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3254 |
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| Symbol | |
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| ID | 7260270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3488206 |
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| End bp | 3489795 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643563176 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_002459709 |
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| Protein GI | 219669274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000111312 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCATAT CCCTTGAAAA ACAAATCCGT TTCCGGAAAA CATTTGCTAT TATCTCCCAC
CCTGATGCAG GGAAGACCAC GCTGACTGAA AAATTGCTGT TGTTTGGGGG AGCTATCCAT
CTGGCAGGGA ATGTTAAGGC CAGAAAAACC CAACGCTATG CTACTTCAGA CTGGATGGAA
CTGGAGCGGC AGAGGGGAAT TTCGATTACC TCCAGCGCCA TGCAGTTTAA TTATCAGGGA
TTTGTCATTA ATATTCTGGA TACTCCGGGT CACCAGGATT TCAGTGAAGA TACCTATCGC
ACGTTAACCG CTGCCGACAG TGCTGTGATG CTGATCGATG CGGCGAAAGG TGTGGAGACA
CAAACCATTA AGCTTTTCGA AGTCTGCAGG CGCAGGGGGA TTCCCATTTT TACGTTCATT
AACAAGATGG ACCGGGAGGG GAAGCACCCC ATCGATCTGA TGGATGAAGT GGAGAAAGTT
TTAGGCATCG AAGCCTATGC CATGAATTGG CCCATCGGCG GCGGAGCTGA TTTTAAAGGA
ATTTATGACC GGCAAACGGG TCAGGTGGAG TGCTTTACCG ACGGATTGCG CAAAGGCCAT
GATGATACAC GGCAAACAGG TCACATTGAC GATCCCTGGA TCAAAGAATG GATCGGGGAA
GATTTGCTGC AGCGACTCCG GGAGGAAATC GAACTTTTGG ATATGGCCGG GAATGTCTTT
GACCAGGAGC GGATGGATCG GGGGGAAGTA ACTCCCGTGT TCTTTGGCAG CGCTTTGAAT
AATTTTGGTG TACCCAATTT CCTGGACAGC TTCTTGAAAT TAGCCCCGGC TCCCGCCCCG
CGGCAATCCA ACCTAGGGAT TTTAGAGCCG GCAAGTCAAC AATTCGTGGG CTTTGTCTTT
AAGATTCAAG CCAATATGAA CGCCATGCAT CGGGACCGTA TTGCTTTCAT TCGCATCTGC
TCGGGCAGAT ACGAACGGGG AATGAATGTC ATTCATAATC GGACCCATCG CAAAATGAGG
CTGGCTCAGC CTCAGCAGCT CTTTGCCCAG GAGCGGACCA TTTTGGACGA GGCATATGCC
GGAGATATCA TTGGGGTTCA TGACAGCGGA GTACTCCGCA TCGGTGATGT TCTGGCGGAA
AAGGATGGTA TTGAATTTGA GGCCATGCCG TTTTTCAGTC CGGAAAACTT TGCCCGGGTC
AGCATCGCCA ATGCCTTGAA AAGAAAGCAA TTTATCAAGG GAATACAGGA GCTTCAAGAA
GAAGGGGCCA TCCATGTTTT CCGGGATTTG AATATTGGGG TAGAGGCTCC CGTGATCGGA
GTCGTGGGCC AACTGCAGTT TGAAGTCCTG GAATACCGTC TGCGGGATGA GTATGGAGTA
GAGGTCCAAA TCAACAATTT GCCTTACGAA ATGGTTCAAT GGATACCTAA GGATGAAGAA
AAGATTCGTA TTCTTAAGGA ATCCAGCATG AGTATGGTGG TCTTGGATCA GGATGAAAAT
TATGCTGTCC TGCTTCTGGA CAAATGGAAG GCGAATTGGT TAAGCGAGCG CTATGGAGTA
GAGTTTCATC CCCAGCCGAT CAGGGAGTAG
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| Protein sequence | MSISLEKQIR FRKTFAIISH PDAGKTTLTE KLLLFGGAIH LAGNVKARKT QRYATSDWME
LERQRGISIT SSAMQFNYQG FVINILDTPG HQDFSEDTYR TLTAADSAVM LIDAAKGVET
QTIKLFEVCR RRGIPIFTFI NKMDREGKHP IDLMDEVEKV LGIEAYAMNW PIGGGADFKG
IYDRQTGQVE CFTDGLRKGH DDTRQTGHID DPWIKEWIGE DLLQRLREEI ELLDMAGNVF
DQERMDRGEV TPVFFGSALN NFGVPNFLDS FLKLAPAPAP RQSNLGILEP ASQQFVGFVF
KIQANMNAMH RDRIAFIRIC SGRYERGMNV IHNRTHRKMR LAQPQQLFAQ ERTILDEAYA
GDIIGVHDSG VLRIGDVLAE KDGIEFEAMP FFSPENFARV SIANALKRKQ FIKGIQELQE
EGAIHVFRDL NIGVEAPVIG VVGQLQFEVL EYRLRDEYGV EVQINNLPYE MVQWIPKDEE
KIRILKESSM SMVVLDQDEN YAVLLLDKWK ANWLSERYGV EFHPQPIRE
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