Gene Dhaf_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3251 
Symbol 
ID7260267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3485268 
End bp3486305 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content53% 
IMG OID643563173 
Producttransport system permease protein 
Protein accessionYP_002459706 
Protein GI219669271 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000970776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCCC GAACTTTCCC CAAAAGCATA CCCTGGATTT TGGGCTTATC CTTGCTCCTG 
CTTCTTTCCG TTGTCATCTG TGTGATGACC GGCTCCGTCT CCCTGCCTTT TCATCTGACC
TGGAAGATCA TTTTAAACCA TCTGCCTTTT TTGAGCTTTG ACCCCAGCTG GTCCTCAGCC
CAGGAATCCA TCGTTTGGAA TCTGCGCCTG CCCCGGGTCT TTTTAGCCCT CATCGTTGGG
GCCATGCTGG CAACCTCGGG AGTGGCTTTT CAAGGAATTC TGCGCAATCC TCTGGCTGAT
CCCTATATCC TGGGGGTCTC CTCCGGAGCC GCCATTGGCG CCGCCTCCGC TATCCTTTTT
TTTCGCAGCT TTTCTTTCTT CGGTCAATCG GCCCTGCCCC TCTTCGCCTT TGCCGGAGGG
CTTATTTCTC TGGCCTTTGT CTTCTCTCTA TCCAGACAGC ATGGTCAGTT TGAACGGGAA
ACCTTAATCC TGGCCGGTGT GGTAGTGCAG GCTTTGCTAA GTGCCTTTCT CTCTCTTCTG
ATTGCCGTTT CCGGCGAGCA GATGCAGCAG ATTATCTTCT GGATGATGGG CAGTCTCGCC
AACAGCAGCT GGCAGAATGT CCTGATCCTT CTCCCTTATT TTCTGCTCGG CTTGGCCTAT
CTTCTCTTGC AAAGCCGGGA GCTGAATGTC ATCGCTTTAG GGGAAAGAGC GGCCACTCAC
CTGGGAATCA ATGTGGAGCG CAAGAAAATT GCCATTCTCA TGGTCGGTTC CTTATTGGCC
ACAGCCGCAG TCTCCATGGT GGGGATTATC GCCTTTGTCG GTTTGATCAT TCCCCATCTC
ATGCGCCTCC TCGTAGGACC TGACCACCGG ATTCTCTTGC CGGTGTCTAC TTTAGCGGGA
GCAATCTTCC TTTTGTGGTC GGATACCATG GCCAGAACCC TGCTCCAATC CCAGGAGATT
CCCATCGGAG CGATTACAGC CTTTGTCGGC GCACCCTTTT TCGCCTATCT TTTAAAAAGT
GGTTTAAGGA GGGGTTAG
 
Protein sequence
MNSRTFPKSI PWILGLSLLL LLSVVICVMT GSVSLPFHLT WKIILNHLPF LSFDPSWSSA 
QESIVWNLRL PRVFLALIVG AMLATSGVAF QGILRNPLAD PYILGVSSGA AIGAASAILF
FRSFSFFGQS ALPLFAFAGG LISLAFVFSL SRQHGQFERE TLILAGVVVQ ALLSAFLSLL
IAVSGEQMQQ IIFWMMGSLA NSSWQNVLIL LPYFLLGLAY LLLQSRELNV IALGERAATH
LGINVERKKI AILMVGSLLA TAAVSMVGII AFVGLIIPHL MRLLVGPDHR ILLPVSTLAG
AIFLLWSDTM ARTLLQSQEI PIGAITAFVG APFFAYLLKS GLRRG