Gene Dhaf_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3249 
Symbol 
ID7260265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3482197 
End bp3483165 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content51% 
IMG OID643563171 
Productperiplasmic binding protein 
Protein accessionYP_002459704 
Protein GI219669269 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000036127 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAA AAAAACAGGC ATTCACCCTG CTGATAACCC TATGGGTGAC CTTAGTTTTG 
CTCAGCGGCT GCAATTCACC CTCACAGCAA GGTGCCGCTC CTCCCGAAGC GCCCTCCGGG
CAAGATACCA TCCAGACTAC AAGTTACCCT TTAACCTACA CAGATGATAC AGGTGTGGCC
ACCACTCTGG AAAAGGAACC TCAACGCATT ATCTGTCTGG CTCCGCCTTC CACGGAGATC
TTAAGCGCTC TGGGCCTGGA TCGCAAGCTG ATCGGCTTAA CTGTGTACGA TAATTACCCG
GTGGGTATTC AGGAGAACGC AGAATATATT TTTGAAGACA GTTTAAACCC CAATCTGGAG
CAGCTCATTC AGCTCAAACC GGATTTGGTC GTGACCGGAA TGCATAAGGA CAGCTTTATT
AACTCCCTGC GCAGTTTGGG GATACCTGTC GCTCATTTAA ACCCCCAAAG TCTGGAAAGC
ACCTATCAAA CCATTGAGAA ACTAGGATAC ATTACCAATA CTCAGGAACA GGCCCAGGCT
GTGCTCCAGG GAATGAAAGC AAAGGAACAA GCCATTGCCG ATAAAGTAGA GGCCATCAAG
GAAGCTGAGC GGGTCAGGGT ATGGATTGAA GTGGATCCAG GTCTTTTTAC CGCCGGTGCA
GGAACCTTTC TTAACGAACT CATCACCAAA GCAGGTGGCA TCAATATCGC CAGTGATGTC
CAGGATTGGG CGCAATACAG CGAGGAGCAG GTGATTGAGA AGAACCCTCA GGTTATCCTG
AGCACCTACT CCTACTACAT GGATAATGTG AAGGCCACCA TCGTCGCCCG CCCGGCTTGG
CAAGCCATCG ATGCTGTCAG CAATGACCGG ATTTACGATC TGGACAGCGA TATGGTGACC
CGCTCCGGTC CCCGGATCGT CGACGGCTTG GAAACCATCG CTAAAGCCCT TTACCCGGAG
CGTTTCTGA
 
Protein sequence
MNRKKQAFTL LITLWVTLVL LSGCNSPSQQ GAAPPEAPSG QDTIQTTSYP LTYTDDTGVA 
TTLEKEPQRI ICLAPPSTEI LSALGLDRKL IGLTVYDNYP VGIQENAEYI FEDSLNPNLE
QLIQLKPDLV VTGMHKDSFI NSLRSLGIPV AHLNPQSLES TYQTIEKLGY ITNTQEQAQA
VLQGMKAKEQ AIADKVEAIK EAERVRVWIE VDPGLFTAGA GTFLNELITK AGGINIASDV
QDWAQYSEEQ VIEKNPQVIL STYSYYMDNV KATIVARPAW QAIDAVSNDR IYDLDSDMVT
RSGPRIVDGL ETIAKALYPE RF