Gene Dhaf_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3238 
Symbol 
ID7260254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3471954 
End bp3472868 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content49% 
IMG OID643563160 
ProductABC transporter related 
Protein accessionYP_002459693 
Protein GI219669258 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA TAATTGAGGT TGTAGATTTG CATAAGAGCT ATGGTCATGT TCAGGCGGTT 
AAGGGGCTCA ATTTTTATGT GGAAAAAGGC AAATTATTTG CCTTTCTGGG GCCCAATGGT
GCCGGAAAAT CGACGACAAT CGATATCATC TGTACTTTTT TAAAGCCGGA CCGGGGACGG
GTCGTTGTGG ACGGCTACGA ATTAGGCAAA GAGGATAATA AAATCCGCTC CGTGATTGGT
GCGGTATTTC AGGATGGCCT CCTGGATCCG CTGCTCACGG TAGAAGAGAA TTTGCAGATC
AGGGGCGGTT TCTACGGGCT GAAAAAGGCG GTTTTGGCTG ATTCCATAAA ATCCATTGCG
GTCCTTACTG GGGTAGCTGA ATTTTTGAAG CGGCCCTATG GCAATCTTTC CGGGGGCCAG
CGCCGCCGGG CGGATATCGC CCGGGCCTTG GTTAACGCAC CGAAGATTTT GTTCTTGGAT
GAACCCACCA CAGGGCTGGA TCCTCAGACC CGTAAAAATG TCTGGGAAAC CATCCAGAAA
ATGCAGAAAG AAAAGGATAT GACCATCTTT CTGACCACCC ACTATATGGA GGAAGCTGCC
GAGGCCGATT ATGTTATAGT GATCGACAAC GGCGAAATCG CCGCTAAAGG AACACCCACA
GAGTTGAAAC GGGACTATGC CAGTGACCGG CTTAAGCTTT CTTATCACGA CAAAGAAAAG
CTAAGCACAG CTCTTCAGGA AATGCACATC CCTTACCACC AGGTTGCCGA TCAAATCATT
ATCGAGCTCT CATCAACTCT GGAGGCTTTG CCGATTCTGG CCGGATGCCA AGCTTATCTC
ACCGGCTTGG AAGTCAGCCA TGGTACCATG GACGATGCCT TTATTAAGAT CACCGGAAAG
GAGATAAGAG AATGA
 
Protein sequence
MDKIIEVVDL HKSYGHVQAV KGLNFYVEKG KLFAFLGPNG AGKSTTIDII CTFLKPDRGR 
VVVDGYELGK EDNKIRSVIG AVFQDGLLDP LLTVEENLQI RGGFYGLKKA VLADSIKSIA
VLTGVAEFLK RPYGNLSGGQ RRRADIARAL VNAPKILFLD EPTTGLDPQT RKNVWETIQK
MQKEKDMTIF LTTHYMEEAA EADYVIVIDN GEIAAKGTPT ELKRDYASDR LKLSYHDKEK
LSTALQEMHI PYHQVADQII IELSSTLEAL PILAGCQAYL TGLEVSHGTM DDAFIKITGK
EIRE