Gene Dhaf_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3233 
Symbol 
ID7260249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3466549 
End bp3467634 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content48% 
IMG OID643563155 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002459688 
Protein GI219669253 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCTA AACCTACTGG ATGGTTCATG TCGCTGGTCA TGATGTTGAC ATTGATGTTG 
GGAGGGTGTA CTCAGGCGGC TGCGGTAATC CCTCCGGAAA AGGAACATCT GGTTCAAGTG 
CAAAAAGCTG AGGAAGGGGC TTATCCGGTG GACCTGCGCT ATACAGGGCT TACCTCTGCC 
GGCGAATTGA AAAAGTACAG CTTTAAAATT CCGGGGAAAC TCACGGATAT TGCTGTGGAA 
AAGGGAGCCT TGGTGAAGCC GGGCCAAAAG CTTGCTTCTT TGGACACTGC GGAGTATGGC 
TTAGCAGTTC AAGCTTCGCA GCTCAATGTC ACCAAAGCAG AGAAAGCCTA TACAGAAGCC 
CGGGATAACT ATGGGAAGTT GGAAAAGCTC CATGAAGCAG GGGCTCTGCC GGAAGCGGAT 
CTTATTAAGG TTAAGCTGGA TTTGGATGTG AAAGAAGCAA CCTATCAGCA AGCTCAACTT 
GAGCTGGAAG CCAAACAGAT TCAGCTCAAT GACGCACAGC TTTATGCTCA GAATGAAGGC 
TATGTGGTGG ATATTCTTTT CCGGGAAAGC GAAATCCTTG CCGCCGGATA TCCGGTGGTG 
GTAATTCGCT CCCCTGAACA GAAAGTAACA GTGGGTCTGT CTCAAAGTGA TGTTCAGAAG 
GTCAAGGTGG GGGATAGGGT GGAAATCACG TTAGATGGGC AAAAAGGAAC AGGACATGTT 
GAACGGCTGG AAGCTGTTCC GGATCCCCAA ACCCGTACTT ATACTGCAGA AATCCTTATT 
ACTGAGCCTT TTTCCAGTGA GCGATATTAT CTTGGGGCCA CAGCCGAGGT GAAGTTTGCC 
CAAGGTGAGG CAGCGGGGAT ATGGGTTCCT TTGGCCTGCA TCCTCAATGA TGGTGAAGAT 
TATGTTTTTT TGGTTGAAGA GGAGCGGGCG GTGAAGAGGA ATATTAAGTT AATGGATACC 
CAAGGGTTCA ATATCCGGGT GGAAGGCTTA AAGCCAGGGG AGCATTATAT ATTCAGTGGG 
ATGAAAAGTT TAAAGGAAGG ACAGAAAGTC AGGATTCAAA GCGAGGGCAC CTCCCATGAA 
CAATAA
 
Protein sequence
MRSKPTGWFM SLVMMLTLML GGCTQAAAVI PPEKEHLVQV QKAEEGAYPV DLRYTGLTSA 
GELKKYSFKI PGKLTDIAVE KGALVKPGQK LASLDTAEYG LAVQASQLNV TKAEKAYTEA 
RDNYGKLEKL HEAGALPEAD LIKVKLDLDV KEATYQQAQL ELEAKQIQLN DAQLYAQNEG 
YVVDILFRES EILAAGYPVV VIRSPEQKVT VGLSQSDVQK VKVGDRVEIT LDGQKGTGHV 
ERLEAVPDPQ TRTYTAEILI TEPFSSERYY LGATAEVKFA QGEAAGIWVP LACILNDGED 
YVFLVEEERA VKRNIKLMDT QGFNIRVEGL KPGEHYIFSG MKSLKEGQKV RIQSEGTSHE 
Q