| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3202 |
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| Symbol | |
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| ID | 7260218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3428631 |
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| End bp | 3431870 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643563125 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_002459658 |
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| Protein GI | 219669223 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTTA ATCCAGCCTG GAAAAAAGTA CTCGTCATTG GCTCAGGTCC CATCGTCATC
GGTCAGGCGG CAGAATTCGA CTATGCCGGC ACTCAGGCCT GCAAGGCTTT GCGGGAAGTT
GGCATCGAAG TCATTCTGGT GAACAGCAAT CCGGCCACCA TCATGACCGA TGAACAGATG
GCGGATCGCA TCTATCTGGA ACCCCTTCTG CCCCAGAACC TGGAAGGAAT CCTGGCTCAG
GAACGGCCTG ATGCTCTCCT CCCCACCTTA GGCGGGCAGA CGGGATTGAA TTTGGCTATG
AAGCTCCAGG AAGAAGGAAT TCTGGAGCGT TACGGAGTTG CCCTGATCGG ATGTAACGCG
GAAACCATCT ATAAAGCAGA AGACCGGGAA GCTTTCAAGG AAACCATGCT GGAAATCGGT
GAACCCCTTG CCGAAAGTGC CATCGTCACC AGCCTGGAAG AAGGTCTGGC ATTTACCGCC
CGCCGGGGAT ATCCGGTGAT TGTCCGTCCG GCTTACACCT TAGGGGGTAC AGGAGGGGGC
TTTGCCAAAA ATGAAAAGGA GCTTCTCGAG GTGCTTCACC GGGGACTGCA AGCCAGCCCC
ATTCATCAGT GCCTCTTGGA GCGCAGTGTG GCGGGCTGGA AAGAAATTGA GTACGAAGTG
ATGCGGGATG CCATGGATAA CTGCATTACC GTCTGCAATA TGGAAAATAT CGATCCCGTA
GGAATCCATA CGGGGGATAG CATCGTTGTA GCTCCCTCAC AAACCCTGAC CGATGGCGAG
TACCAAATGC TGCGGTCATC TTCCCTGAAA ATTATCCGGG CCCTGGGTGT GAATGGAGGC
TGTAATGTTC AGTTTGCCCT GGACCCTGAG AGCAGGGAGT ATGTGGTTAT TGAGGTAAAC
CCACGGGTCA GCCGCTCCAG TGCCTTGGCG TCCAAAGCTA CCGGCTATCC TATCGCCAAG
ATGGCCGCTC TTTTAGCCGT GGGCTTCACC CTGCCGGAAC TGCGCAACCC GGTTACCGGT
CACACCAGCG CCTGCTTTGA GCCGGCTCTG GATTATGTGG TGGTCAAATT CCCCCGTTGG
CCTTTTGATA AATTTCCGGC GGCGGATAAT CACCTGGGGA CGCAAATGAA AGCCACAGGC
GAAGTTATGG CCATAGACAG GACGCTGGAG GGAGCTTTGC TGAAGGCTGT CCGTTCTCTG
GAAATCGGAG CGGTGGGCTT AAGAATTGCC GACTCAGGGC GTTGGACGGA GATGGAGATC
GAACATAAGC TGGCCCAGGC GGATCATGAA CGCTTCTTTG CTATTGCCGA AGCTTTCCGC
CGGGATTGGA CCATCCTGGA AGTCCAGATG CTGACTAAGA TCGATCCCTT TTTCCTCAAC
AAGCTGAAAG AGCTGGTGCT TTTGGAACGC CGCCTGGGGA GTGAGCCCCT TACCCTGGAG
CTGCTGCGGT CAGCCAAAAG CCAAGGGTTT TCCGACCAGG CCATCGGTCG CTTAAGAGGC
GTAACCCAGG AAGAGATCCG GCAGGAACGG TGCCGCTATG GCTTGAAGCC TGTCTACAAA
ACAGTGGATA CCTGTGCTGC CGAATTTTAT TCCTCCACCC CCTATTACTA TTCTACTTAT
GAGGAAGAGG ATGAAGTGGC AGTTCATTCC GGCCCCAAAG TCATTGTTCT GGGCTCGGGA
CCGATTCGGA TCGGACAAGG GATAGAATTT GACTATTGCT CCGTTCATGC TCTTTGGGCC
TTACAAGAGC TGGGAATTGA GTCCATCATG ATCAACAATA ATCCGGAGAC GGTTTCTACG
GATTTCGATA CGGGAGATAA GCTTTATTTT GAACCCTTAA CCTTAGAAGA TGTCCTCCAT
ATTATTGAGA AAGAAGAAGC TGATGGTGTT TTGGTTCAAT TTGGAGGTCA AACGGCCATT
AACCTGGCGA GTCCGCTGCA AAAAGCCGGG GTAAGGATTC TGGGCAGTCA AGTCGATGCC
ATCGATAAGG CCGAAGATCG GGAACGCTTT GCCCAGCTGC TTCTTGAACT GGGAATTCCT
CAGTCGGAAG GCTGTGCAGC GACCTCAGTC AGTCAGGCCA GGGCTATTGC TGGGGAACTG
GGTTTTCCGG TGCTGGTCCG GCCTTCCTAT GTTATTGGCG GCAGAGCTAT GCAGGTGGTG
GAGGACCTTG CCGAGCTGGA AGGCTATCTG ACCCGGGCTA TCACCCTATC CCCGGAACAT
CCTATCCTTG TGGACCGCTA CCTGGAAGGG AAAGAAGTCG AGGTGGACGC TATTGCTGAT
GGTGAGATCA CGGTCATTCC GGGGATCATG GAGCATATTG AGCGGGCCGG AGTTCATTCC
GGAGACAGCC TGGCTGTCTA TCCCACCCAA AGCCTCACTC CTGCAGAAAT CCAGCAGATT
CAGGATTATA CCTGCCGCAT AGCTAAGGGC ATGGAGGTTC GTGGTCTGCT CAATATTCAG
TTTGTGGTGG TCAACGGTAA AGTCTATGTG ATTGAAGTGA ATCCCCGGGC CAGCCGAACC
GTACCCATTC TTTCCAAAGT TACAGGAATT CCGCTGGTTG CTTTGGCGGT GCGGGTGGCT
ATGGGTGAAA AACTGGCGGA CCTGGGGTAT GCTCATGGCC TGGCCCCGGA GATTCCCTTT
GTCGTCGTTA AGGCCCCGGT CTTCTCCTTT GAAAAGCTTA CCCAAGTCGA AACCTCTTTA
GGTCCGGAGA TGAAATCTAC AGGAGAAGTT TTGGGTATGG ATGTGAATTT TGGGCATGCT
TTGGCCAAAG CCTTTGCGGC ATCCCATGTT CCTCTGCCGG ACAAGGGAGA TATTTTGGTG
GCTGTAGCGG AAAAAGACCG CCCGGAAGCC ATCGCCATGA CCCGGGAACT TTCCCGGCTG
GGCTTTGGGG TAAAGGCCAC CGGGAATACA GCTAAAGCGC TGCTCTTTTG CGGAGTTCCT
TTAGAAGAGG TAAGAGAAGC CAGCACCGAA CTTAAGGAAG CCGTCCGCCG GCAGGAATTC
TCCTTTGTTC TCAGCACCCC CAGCAAAGGA GATTCTGAAG AGCGGACCGG GTACTTATTG
CGTCGTTTGG CTGCGGAGCA CCGGGTACCT TGCCTCACCT CCATGGATAC TGCCCAAGCG
GTGGTGCGCG CCCTTAAGGA GATCCGCAAT CATACTGCGC CGCAAACCCT CCCTTTACAA
GCGTATTTGG CCATGAAGCG TTCTACTGTG GAAAGGAGTA CGCCGATCCC GAACGCCTGA
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| Protein sequence | MPLNPAWKKV LVIGSGPIVI GQAAEFDYAG TQACKALREV GIEVILVNSN PATIMTDEQM
ADRIYLEPLL PQNLEGILAQ ERPDALLPTL GGQTGLNLAM KLQEEGILER YGVALIGCNA
ETIYKAEDRE AFKETMLEIG EPLAESAIVT SLEEGLAFTA RRGYPVIVRP AYTLGGTGGG
FAKNEKELLE VLHRGLQASP IHQCLLERSV AGWKEIEYEV MRDAMDNCIT VCNMENIDPV
GIHTGDSIVV APSQTLTDGE YQMLRSSSLK IIRALGVNGG CNVQFALDPE SREYVVIEVN
PRVSRSSALA SKATGYPIAK MAALLAVGFT LPELRNPVTG HTSACFEPAL DYVVVKFPRW
PFDKFPAADN HLGTQMKATG EVMAIDRTLE GALLKAVRSL EIGAVGLRIA DSGRWTEMEI
EHKLAQADHE RFFAIAEAFR RDWTILEVQM LTKIDPFFLN KLKELVLLER RLGSEPLTLE
LLRSAKSQGF SDQAIGRLRG VTQEEIRQER CRYGLKPVYK TVDTCAAEFY SSTPYYYSTY
EEEDEVAVHS GPKVIVLGSG PIRIGQGIEF DYCSVHALWA LQELGIESIM INNNPETVST
DFDTGDKLYF EPLTLEDVLH IIEKEEADGV LVQFGGQTAI NLASPLQKAG VRILGSQVDA
IDKAEDRERF AQLLLELGIP QSEGCAATSV SQARAIAGEL GFPVLVRPSY VIGGRAMQVV
EDLAELEGYL TRAITLSPEH PILVDRYLEG KEVEVDAIAD GEITVIPGIM EHIERAGVHS
GDSLAVYPTQ SLTPAEIQQI QDYTCRIAKG MEVRGLLNIQ FVVVNGKVYV IEVNPRASRT
VPILSKVTGI PLVALAVRVA MGEKLADLGY AHGLAPEIPF VVVKAPVFSF EKLTQVETSL
GPEMKSTGEV LGMDVNFGHA LAKAFAASHV PLPDKGDILV AVAEKDRPEA IAMTRELSRL
GFGVKATGNT AKALLFCGVP LEEVREASTE LKEAVRRQEF SFVLSTPSKG DSEERTGYLL
RRLAAEHRVP CLTSMDTAQA VVRALKEIRN HTAPQTLPLQ AYLAMKRSTV ERSTPIPNA
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