Gene Dhaf_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3196 
Symbol 
ID7260212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3419417 
End bp3420820 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content49% 
IMG OID643563119 
Productglycogen/starch synthase, ADP-glucose type 
Protein accessionYP_002459652 
Protein GI219669217 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0297] Glycogen synthase 
TIGRFAM ID[TIGR02095] glycogen/starch synthases, ADP-glucose type 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTC TTTTTGCTAT AACTGAAGCT GAGCCTTTTG TCAAGACAGG AGGCCTGGGA 
GAAGTAGGAC GATATCTCCC TTTAGCTCTT CAGGAGCAGG GTGTGGAGAT TCGGGTCATT
CTTCCCCAAT ACAGCAGTAT TCCCCGGAAT TATTTGCAGA AGATGAAGAC GATTAAAGAA
TTCACAGTTC CTCTGGCCTG GAGAAATCAA TATTGCGGAT TAAAGGAATT AAAGTATGAG
GGCATCCATT ATTATTTTTT GGATAATGAA TATTACTTCC GGCGTTCAAG ATGCTATGGG
GACGGGGATG AAGGAGAGCA GTACGCCTAT TTCAGCCGGG CGGTCCTGGA GAGCGTCCGT
TACCTGCCTG AGTTTAAACC GGATATTATC CATTGTCATG ACTGGCATAC GGCCTTGGTG
CCCCTGTTTT TAAAAGCCTT TTATGCCCAG GATACCCTTT ATTACAATAT AAAGACCTTA
TTCACCATCC ATAATCTGAA ATATCAGGGG ATATTTCCTC GGGAGGTCCG GGAGGATGTT
CTGGGGTTGA GTGGAGAGCT TTCTTCTTCA GCCCAGCTTG AATTTTATGG CGGAGTCAAT
TTTATGAAGG CCGGGATCAT GCACAGTGAT CAGGTCACCA CCGTGAGTCC CACCTATGCC
CGGGAAATTC AGCATCCCTA TTTTGGGGAA GGCCTCCATG GAGTCATTCA GGGGCGGAAA
GATTCCTTGC TGGGGATACT TAATGGTGTC CCCCGGCCTT GGCCTTCCCC AACTTTGGCC
GATAAAAGAG CAAACAGGAT GAAGCTCCAG GAGCAGCTGA ATTTTACGAA CAATGAAGAG
ATCCCCATCC TCAGTATGAT TTCACGCTTG GTAGAACAGA AGGGGCTGGA CCTGCTTCTG
CATGTGCTGG ATGAGATTCT GGCCTTGGAT ATCCGGCTGG TTGTCTTAGG CACGGGAGAC
GCCCATTATG AGGAGCGCCT GCAAAGGTTT GCGGAAGGGT ATCCCGGCAA GTTACGAGTT
ATATTAGGCT ATCAGGAAGA ACTGGCCCAC AGGATCTATG CCGGGGCGGA TATCTTTCTC
ATGCCTTCCC GGTTTGAGCC TTGCGGTATA GCCCAGATGA TCGCCATGAG CTATGGCACC
ATTCCTATCG TTCGGGAGAC GGGGGGTTTA AAAGATACTG TCAGGCCCTA TTCCCCAATC
TCGGGGGAAG GGAATGGATT CACCTTTACT GATTACAATG CTCATGAACT CCTCTATGCC
ATTCAAAAGG CGGTGGAGAT GTTCCGGAAT CAAAAAGATA CTTGGCAAAA GCTTCAGGAA
AATGCCCTGA GTTCGGATTT CAGCTGGAAC CGATCCGCTG CCCGGTACCG GGATGTCTAC
GAGAGCTTGT ATTATTCTTC GTAA
 
Protein sequence
MKVLFAITEA EPFVKTGGLG EVGRYLPLAL QEQGVEIRVI LPQYSSIPRN YLQKMKTIKE 
FTVPLAWRNQ YCGLKELKYE GIHYYFLDNE YYFRRSRCYG DGDEGEQYAY FSRAVLESVR
YLPEFKPDII HCHDWHTALV PLFLKAFYAQ DTLYYNIKTL FTIHNLKYQG IFPREVREDV
LGLSGELSSS AQLEFYGGVN FMKAGIMHSD QVTTVSPTYA REIQHPYFGE GLHGVIQGRK
DSLLGILNGV PRPWPSPTLA DKRANRMKLQ EQLNFTNNEE IPILSMISRL VEQKGLDLLL
HVLDEILALD IRLVVLGTGD AHYEERLQRF AEGYPGKLRV ILGYQEELAH RIYAGADIFL
MPSRFEPCGI AQMIAMSYGT IPIVRETGGL KDTVRPYSPI SGEGNGFTFT DYNAHELLYA
IQKAVEMFRN QKDTWQKLQE NALSSDFSWN RSAARYRDVY ESLYYSS