| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3170 |
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| Symbol | |
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| ID | 7260187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3394767 |
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| End bp | 3397124 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643563096 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_002459629 |
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| Protein GI | 219669194 |
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| COG category | [C] Energy production and conversion
[K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0348] Polyferredoxin
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0158223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGAAA AACTCCATCT TCTCTCTGAG GTGCCTTTTC TTGCGGATTT GTCACAACAG
GATCGAATTG AGTGTGCTCA CGAATTTCAC TGGGAGATCT ACCCTAAAGG GGCCGTTCTC
ATCGAAGCAG GAAAAAAGCC TGCGGCAGTC TATATACTCG AAGAAGGAAA GCTGGACAGT
GAGGATAAGG TATTGGGCAT GGTTTCTTTG GTCACGGGTA AGGCGGCCAC GGAAACGATT
CGTGCTTTGG AGCCGGTCCG CCTCCTGACC ATTAAGGCCG AAGATTTCGC TCGTATCTTG
TTGCGCTGGC CCCAGATCTA CAGCACTATC ATCGGCAATT TAACGGATAA TCTTGCTGAA
ACCCATCAAA TGCTCTCGGC AAGCCGTTAT AAGGAAGTCT TACGGTCGGC CATTCAACTT
ACCCGGTATA AAGATAAATT TTACGGGATC TGGGGCAGTG TGAAAACCAC CCATGAGGTA
GAACGCTTGT TTAAGAAGCT CCAGCAGACT GAGGGGCATT TGCTGATCAG GGGAGAGAGA
GGCACGGGCC GGCAAATGGT GGCCTGGTAT GCTCATCAGC AGCTTTTTGG AGAGGCGGCT
CCCTTTGTCG TCCTGAATGG TCAGCGTTTT GAACAGCAAT GGGGTTATCT GCTCAAAGAG
GAAAAGAAAG CTGCAGAAAG CTCTTACGCT GCTTTTACGT TTGAGGATAT TGCCGCAGGG
GGGACCCTTT TCATCCAGGA AATAGATCAA ATTACCCCTG AGCTGCAAAT AAGGCTGGCT
CAGGTGCTTG GCACTGCTCA TCATTCCTGT CTGGTCATCG GCAGTATTCA GGAAGATAGC
AAGCATAAGG ATCCCCAGCT TATGCCTGAA TTGGCTGCTT GTTTTGAGCA TAGTTACTCC
ATAGCGCCCT TACGGGAGCG TAAAAGAGAT ATCCCGATCA TCGCTCAAGG CATTGTGGAG
AGTTTAGCTC AGAAGCATCA GCGCAATGTA CCTGTATTAA CCTCTGAAGC GACACAACTT
CTCCTGTCTC ATAATTATCG CCAAGGCAAT GTAACAGAGC TTATTCAGGT AATGGAGCGG
GCCTTCTTTC TCGCCGATCA GGATGTCATC GGGTTAGAGC AAATCTTTTT TGGTCCCACT
GCGGAAAAGA TCGGGAGTAA AATCAATCTT TTACAATGGG GATTCTTTAA AAGTTTATTC
AAAAGTAGGA AGCTTCTCCA CAGTCTGCAA TGGATTTCGG CAGTTTTATT CCTTCTGCTG
ATTGTCGGAC TGGTTTTCCT TCCTCAATTG CCTCTTACTA TGAAAGTTTT TGTCTTGGTT
TGGGGCCTTT GGTGGCCTTC TCTGGCTATT CTATCCCCTT TATTGGGGAG ACTATGGTGC
ACATTTTGCC CTTTTTCCAA AATTATGGAG TTTGTACAAG ATCGCTATCA CCCGAAACGG
CCGCTGCCCG CCCTCTTTGT CAAATATGAT TATCTGATGG TGAGTGTTTT ATTTGCCCTG
ATTTTTTGGG CGGAAATCTT TACGGGCATG CGTTCCCATA TGCTTTTTAC CGCTTTGCTG
CTCCTGGTTA TTCAAGGTCT GGCCATTATT GTCAGTGTTC TTTATCCCCG CCATGCCTGG
TGCCGGCATT TTTGCCCTTT GGGAGGATTT ATCGGGACGG CCTCCATCGG TTCTCTCTTG
GAAGTAAGAG CAGATGCAGC GGTATGCCTG AATAAATGCA CCACCTTTGA TTGTTATGTG
GGCAGGGATG GGGTCAAGGG CTGCCCGATG AGTCAGCATT TGCCCTATCT GGATAATAAT
TTGGATTGCA AATTATGCTT TAAATGCGTC AGCAATTGCC AGCATGAGAA TGTCCAGGTC
AACTTAAGAG TACCGGCACG GGAGGTTTGG CATCTGACCC GTGTCAATCA AGGGTATGCT
GTTTTTATTG GTATGCTCAT GGGAATCCTT TTTCCGATCA TGGTTTTTGA ACCTCTTCAT
GGCTCCATGC CCCCAAGTCA ATGGCAGCTT TGGTTTACCC TGACCTATTT GCTGGCGGCT
CTGCTGGGCG GAGCACTTGG CTGGTGGCTG GGGAAGCCTT TTAAGACGAA AGCGGCCTCT
AAGCGGATTA AATTGGTGTT TGCTTTTATT CCCCTGATCA TCGGCGGGCA TATTGTGCAT
CAGATGGGCT ATATTCCGGG GATTAATCAT CTCTTCTTCG GAATGGGATA CCATGAAGAG
GGTGGGATGC AAACCCTGTT CATTGCGGCC AAAAGCTTAG GCTATGGACT TGCCATGCTT
ACGGGAATCT TTTTAACTGT GATTACGGTA GGATTAACCC TTCACCAATA CAGCAAAGCT
AAAGATCCTA ATCATTGA
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| Protein sequence | MKEKLHLLSE VPFLADLSQQ DRIECAHEFH WEIYPKGAVL IEAGKKPAAV YILEEGKLDS
EDKVLGMVSL VTGKAATETI RALEPVRLLT IKAEDFARIL LRWPQIYSTI IGNLTDNLAE
THQMLSASRY KEVLRSAIQL TRYKDKFYGI WGSVKTTHEV ERLFKKLQQT EGHLLIRGER
GTGRQMVAWY AHQQLFGEAA PFVVLNGQRF EQQWGYLLKE EKKAAESSYA AFTFEDIAAG
GTLFIQEIDQ ITPELQIRLA QVLGTAHHSC LVIGSIQEDS KHKDPQLMPE LAACFEHSYS
IAPLRERKRD IPIIAQGIVE SLAQKHQRNV PVLTSEATQL LLSHNYRQGN VTELIQVMER
AFFLADQDVI GLEQIFFGPT AEKIGSKINL LQWGFFKSLF KSRKLLHSLQ WISAVLFLLL
IVGLVFLPQL PLTMKVFVLV WGLWWPSLAI LSPLLGRLWC TFCPFSKIME FVQDRYHPKR
PLPALFVKYD YLMVSVLFAL IFWAEIFTGM RSHMLFTALL LLVIQGLAII VSVLYPRHAW
CRHFCPLGGF IGTASIGSLL EVRADAAVCL NKCTTFDCYV GRDGVKGCPM SQHLPYLDNN
LDCKLCFKCV SNCQHENVQV NLRVPAREVW HLTRVNQGYA VFIGMLMGIL FPIMVFEPLH
GSMPPSQWQL WFTLTYLLAA LLGGALGWWL GKPFKTKAAS KRIKLVFAFI PLIIGGHIVH
QMGYIPGINH LFFGMGYHEE GGMQTLFIAA KSLGYGLAML TGIFLTVITV GLTLHQYSKA
KDPNH
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