Gene Dhaf_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3138 
Symbol 
ID7260149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3353844 
End bp3355040 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content52% 
IMG OID643563058 
Productprotein of unknown function DUF182 
Protein accessionYP_002459597 
Protein GI219669162 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.238524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAG AGATTAAAAT GGGGCTGCAG CATGTTCTTG AAGAAAAACT GGAGGCAGCT 
TTGATTACCG TCACCAAAGT GTTGGGCTCC GCCCCCAGAA AACCGGGAGC ACAAATGCTG
GTTCTGGCGG ACGGAACCAG CGCAGGGACC ATTGGCGGCG GCTGCGGTGA GGCTGATGCC
AGGCAGGCAG CCCTTCAAGT CCTGGCCACG GGAAAGCCAA GGAAGCATTG TTTGAATATG
ACGGCGGACA TCGCCGAGGA TGAAGGTATG GTTTGCGGCG GTATTATGGA ATTATTTATC
GATTACCTGG GCCGGCACAA TGGGACGGAA CAGCTCAATC TCCTGGAAAA CTATGTGCTT
TCCTTCCATC ACGGCGAAAC CCCTGTCCTG GTTACCTTAA CGGAGTCCAA ACAGGACAAG
GCCGGTCAAA AGCTGGTCAT TCAAAAAAAT GGTCAGGTTA CAGGGGATTT AGGCTTACCC
ATACTGAACC AGATAGCCCT TGAGGAGGTT GGGGCGGGTA GGGGTCATGG CCATTTTGCT
GTGCTCAATC TTGACGAGAG GTTCAATCCC TGTGACACAA CCACTGAAGT CGCCTACCAG
ATGCTTCTTG AGCCACCGGT CTCAGAAACG AAGCTGGTGA TTTTAGGAGC AGGACATATT
GGCCTGCCTT TGGCCGGTAT GGGAAAAATG CTGGGTTATG AGGTCACCGT CGTGGATGAC
CGGCCCTCCT TTGCCAATTC CGGCCGGTTT AGAACGGCTG ACCGGGTGAT CTGCAATGAT
TTTGAAAAAG CCTTAGCAGA CCTGGTCATC GACTCCCAGA CCTATGTGGT CATCGTCACC
CGAGGTCATC GGCATGATAA GGTCTGCTTG AAAAGAGTAA TTCATCAACC GGCGGGCTAT
ATCGGGATGA TTGGCAGCCG CCGCAGAGTG AAGGCGATGT TGGCCGAATT ACAGGAAGAA
GGGATTCCGG CCGCAGCCTT AGAGAAATTG TACTCCCCCA TCGGCTTGAA GATCGGCGCG
GAAACTCCTG AAGAAATTGC CGTTTGCATT CTGGGCGAGA TCATCAAGGT TCAGAGGGAG
CATAAGGACA GGGTAAAACA GCAAGACGGT GTAAGGCAGC AAGATAATGT AAAACTGCAG
GAAGAGCCGG CAACTAGTGT CAGGAACAAT GAAGAACCTC AGAAAATGCT CGTATGA
 
Protein sequence
MDKEIKMGLQ HVLEEKLEAA LITVTKVLGS APRKPGAQML VLADGTSAGT IGGGCGEADA 
RQAALQVLAT GKPRKHCLNM TADIAEDEGM VCGGIMELFI DYLGRHNGTE QLNLLENYVL
SFHHGETPVL VTLTESKQDK AGQKLVIQKN GQVTGDLGLP ILNQIALEEV GAGRGHGHFA
VLNLDERFNP CDTTTEVAYQ MLLEPPVSET KLVILGAGHI GLPLAGMGKM LGYEVTVVDD
RPSFANSGRF RTADRVICND FEKALADLVI DSQTYVVIVT RGHRHDKVCL KRVIHQPAGY
IGMIGSRRRV KAMLAELQEE GIPAAALEKL YSPIGLKIGA ETPEEIAVCI LGEIIKVQRE
HKDRVKQQDG VRQQDNVKLQ EEPATSVRNN EEPQKMLV