Gene Dhaf_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3130 
Symbol 
ID7260141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3343886 
End bp3344962 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content46% 
IMG OID643563050 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_002459589 
Protein GI219669154 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000658834 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAGG ATATAACGAT TGAAGAGTTG CTGAAAATTA AAGATATAGT TCTTCTCGAT 
GTTCGCTCTG AAGGTGAATA TGAGGAAGCC ACCATACCTG GTGCACTGAA TCTGCCTCTG
TTTAGTAATG AAGAACGAGC CATGATTGGC ACTACTTATG TACAGGTCTC GCCCGCTTTA
GCCAAGGAGC AAGGGCTGGC TATAGCCGGC CCTAAGTTGG ATGGACTTTA TAACCAAGCC
AGGCAATGGT CCAAGGGCCG GCCTGTGGTG CTCTTTTGCT GGCGGGGAGG GATGAGGAGC
AAATCCTTAG CCACTGTTTT GGGTCTGATG GGCTTGCCTG TTTACCGCTT GCAAGGGGGA
TATAAGGCTT ATCGCCATTT GGTTCATGAT TATTTTAGCC GGGAGTTCCC CTTTAAAGTT
GTCGTGCTGC GGGGGAATAC CGGTGTAGGC AAGACTGAGC TATTAAAGCG GTTAAGGGCT
GACGGCTATC CGGCCATTGA TTTAGAGTCC CTGGCTAATA ATCGGGGCTC TGTATTTGGG
TCGGTGGGCT TGGGTTCAGG TCCTTCTCAG AAAAGCTTTG AAGCCGCTTT GTACGAAGAG
CTTAGGATGT TAGCGGATTT CCCTTATATT ATAGTTGAAT GTGAGAGTAA GCGCATTGGC
CGCATCAATT TGCCGACCAA TGTTTATGAA GCTATGAAAA TGGGCCCGCA AATCCTGATC
TATGATTCAG TTCAGCATCG GGTTGAACGC TTAATCAAAG AATACACCCA GTATCCTCAT
GCTGACCTGG AGATTAAGTC GGCGCTTGGG CGTCTGACGA AAAACCTGGG ACATAAAACG
ATTGCCCAGT ACAGCGCTTT GCTGGAACAA GGAAATTTAG AAGAGTTTAC AGAAGGAATG
CTGAAATACT ACGATGCTCT TTATGCCTAT CCTAACCAGC CCAGCCATGA TTATGATGAT
TCCATAAGCA ATGAAGATCC GGAAAAGGGG ATCAAAGAAT TGGAGGATTA CCTTGATCAG
TGGTCGGGTA TACTCAGAAG AACAACTTTA TTTGGAATAT GTGATACAGC AAAATAA
 
Protein sequence
MVQDITIEEL LKIKDIVLLD VRSEGEYEEA TIPGALNLPL FSNEERAMIG TTYVQVSPAL 
AKEQGLAIAG PKLDGLYNQA RQWSKGRPVV LFCWRGGMRS KSLATVLGLM GLPVYRLQGG
YKAYRHLVHD YFSREFPFKV VVLRGNTGVG KTELLKRLRA DGYPAIDLES LANNRGSVFG
SVGLGSGPSQ KSFEAALYEE LRMLADFPYI IVECESKRIG RINLPTNVYE AMKMGPQILI
YDSVQHRVER LIKEYTQYPH ADLEIKSALG RLTKNLGHKT IAQYSALLEQ GNLEEFTEGM
LKYYDALYAY PNQPSHDYDD SISNEDPEKG IKELEDYLDQ WSGILRRTTL FGICDTAK