| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3124 |
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| Symbol | |
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| ID | 7260135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3337546 |
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| End bp | 3338874 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643563044 |
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| Product | MiaB-like tRNA modifying enzyme YliG |
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| Protein accession | YP_002459583 |
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| Protein GI | 219669148 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000009336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAAAA AAGTTGCTGT CGTGACTTTA GGATGTCCGA AGAATCAAGT CGATAGTGAA
ATCATGACCG GTCATATGAT GACAAAATAC CAGATCGTGA ATGAGCCGGA GCAGGCAGAT
ATTATCATTA TCAATACCTG TACTTTTATT GAAAGTGCTA AGGCTGAGTC CATCGATATG
ATTCTCCAGA TGTCTCAATA TAAGGAAGAA GGACAGTGTC AGACTCTAGT GGCCACAGGG
TGTTTGGCCC AACGTTACGG TGATGAGCTC TTAGCTGAGA TCCCCGAATT GGACGGGATC
ATGGGGACCG GGAATGTCGC AGAGATTCTG GAGACCCTTG AGGAAGCAGA GAAGAGCAAG
GTCAGAAGAA TCAGCGCCGA GGCGCCCGCC TTTATCTATG ATGAAACCAT GCCTCGTGTC
CGTTTATCCC CTAAGCAGTA TGCCTATGTT AAAGTAGCGG AGGGATGCGA TAATTATTGC
ACATATTGCA TCATTCCTCA TGTGCGGGGC CACTTTCGCA GCCGGACCCA GGAATCCATC
CTTCGCGAAG TAGAGGCCAT GGCTTCCGAA GGGGTAAAAG AGGTTTTACT GATCGCTCAG
GATACTACCC GCTATGGCAA GGACCGTTAT GGTGAATATA GGCTGCCTTC CTTAATCAAA
GAGATTGCCG GGATTGAAGG AATAGAGTGG ATTCGTCTTA TGTATTGTTA TCCGGAATTG
TTTACGGATG AACTGATCAC AGTCATGAAA GAAACGCCCA AAGTTTGCCG TTATCTCGAT
CTTCCTCTTC AACACGCTCA TGATAAAGTC CTGGCTGAGA TGAACCGGAG GGGTACGATC
CGAGAGGCTG AAGGATTAAT TCATAAATTG CGCCAGGAAA TCCCCGACAT TCGTCTTCGC
ACAACTATGA TTACCGGTTT TCCCGGGGAA ACGGAAGAAG AGTTTCAAGC TGTTGTAGAT
TTTGCTAAGA AAATCCGCTT TGACCGCTTA GGAGCTTTTG CCTATTCTCA GGAGGAATCT
ACTCCGGCCG CCCAAAGGGA GGACCAAGTG CCTGAGGAGA TTCGTCAACA GCGGCGTGAT
CAACTCATGG AGCTGCAGCA CGACATTGCT TACGAGCAGC AGCAGAGATG GGTAGGGCAG
ACCCTAAAGG TTCTTATCGA AGAAGCATTG CCGGATCAAC GCTGGGTCGG CCGCAGTGAA
GGGGATGCTC CGGAGATCGA CGGTGTTGTC TATGTTGATT CACCTGGGGA ACTTGAAATC
GGGGACTTTG TACTGGTTAA GATTACCGGA GCAGATAGCT ACGATTTAAT GGGAGAGGTT
GTGCAGTGA
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| Protein sequence | MNKKVAVVTL GCPKNQVDSE IMTGHMMTKY QIVNEPEQAD IIIINTCTFI ESAKAESIDM
ILQMSQYKEE GQCQTLVATG CLAQRYGDEL LAEIPELDGI MGTGNVAEIL ETLEEAEKSK
VRRISAEAPA FIYDETMPRV RLSPKQYAYV KVAEGCDNYC TYCIIPHVRG HFRSRTQESI
LREVEAMASE GVKEVLLIAQ DTTRYGKDRY GEYRLPSLIK EIAGIEGIEW IRLMYCYPEL
FTDELITVMK ETPKVCRYLD LPLQHAHDKV LAEMNRRGTI REAEGLIHKL RQEIPDIRLR
TTMITGFPGE TEEEFQAVVD FAKKIRFDRL GAFAYSQEES TPAAQREDQV PEEIRQQRRD
QLMELQHDIA YEQQQRWVGQ TLKVLIEEAL PDQRWVGRSE GDAPEIDGVV YVDSPGELEI
GDFVLVKITG ADSYDLMGEV VQ
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