| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3098 |
|---|
| Symbol | |
|---|
| ID | 7260109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3314173 |
|---|
| End bp | 3315339 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643563018 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_002459557 |
|---|
| Protein GI | 219669122 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00347911 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGCGC GGCGTTTAAG CAGTTTAGGA GCATCTGTAT TTACAGAAAT GGACGATTTA
AGAAAAGAGT TGGAGAAGGC TGGTAAACAG CTGATTAATC TTAGCATCGG CAGCCCTGAC
CGCTCCCCCT CCGCAGAGAT TCGCAAGGTC CTGGCTGAAG GGGTCCTTGA CGGCGGGAGT
TATGGCTACA CTCTGACCCG GGGGACAGAA AGCTTTCGGT CAGGATGTGC CCGGTGGTAC
AAAGAGCGCT TTGGCGTCAA TTTGGACCCG GAAAAAGAAG TGCTTCCTTT AATGGGTTCT
CAGGACGGGC TTGCCCATAT CTTTTTAGCT CTGTGCGATC CCGGAGATGT GGCTTTAATA
CCTGATCCGG GGTACCCCAT CTACACGGCG GGATTAGTCC TGGCCGGAGG AGAAAAGGTT
GCTCTGCCTT TAAGGGAGGA AAACGGCTTT TTGCCGGATC TGTCGGCCAT TGAGGATGAG
GTGGCCCAAC AAGCTAAAAT CATGTTTCTT AATTACCCTA ACAACCCCAC TGCGGCGGTG
GCGCCTTTGT CCTTTTTCGA AGAAGTTGTT GATTTTGCCC GGAGGAACAG GATTGTGGTG
TGTCATGACG CCGCCTACTC GGAGTTAGCC TTTGACGGTT ACCGTCCCGT GAGCTTCCTT
CAGGTTCCGG GGGCCAAAGA AGTGGGGATT GAATTTCACT CCGTCTCCAA AACCTACAAT
TTGGCAGGGG TCAGACTGGG ATTTGCGGTG GGCAATGGGG AAATCATCGG GGCCTTGGCT
GAGCTGAAAT CGAATATCGA CTACGGGGTA TTTGAGCCTG CCCTGCAGGC GGGTGCCTAT
GCCCTCAGTG CCTCTCAGGA AAATGTTGAA CAAAACCGCC GGGCCTATCA GGAACGGAGA
GATATCTGGG TTAAGGGGTG TGCTCAGGCA GGGTGGTCCA TGCCCTCTCC CCGAGGCTCC
ATGTTTATTT GGGCTCCGGT ACCCACAGCA CAGGATTCCC GCAGCTTTGC CTTCGCCTTA
GCCCGGGAGG CCGGTGTCAT TGTCGTCCCC GGTGTTGCCT TTGGGGAATA TGGAGAAGGG
TATGTGCGGA TTGGCATGGT CCAGGATCAG GAAGTCTTGC AGGAGGCTGT GCGGCGGGTT
CAAGAGTTTC TGGCTGCCCA GGGTTAA
|
|---|
| Protein sequence | MKARRLSSLG ASVFTEMDDL RKELEKAGKQ LINLSIGSPD RSPSAEIRKV LAEGVLDGGS
YGYTLTRGTE SFRSGCARWY KERFGVNLDP EKEVLPLMGS QDGLAHIFLA LCDPGDVALI
PDPGYPIYTA GLVLAGGEKV ALPLREENGF LPDLSAIEDE VAQQAKIMFL NYPNNPTAAV
APLSFFEEVV DFARRNRIVV CHDAAYSELA FDGYRPVSFL QVPGAKEVGI EFHSVSKTYN
LAGVRLGFAV GNGEIIGALA ELKSNIDYGV FEPALQAGAY ALSASQENVE QNRRAYQERR
DIWVKGCAQA GWSMPSPRGS MFIWAPVPTA QDSRSFAFAL AREAGVIVVP GVAFGEYGEG
YVRIGMVQDQ EVLQEAVRRV QEFLAAQG
|
|---|
| |