Gene Dhaf_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3094 
Symbol 
ID7260105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3311250 
End bp3312308 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content53% 
IMG OID643563014 
Productpeptidase S58 DmpA 
Protein accessionYP_002459553 
Protein GI219669118 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3191] L-aminopeptidase/D-esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0856606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGGC GAAGTGCCCG GTCCTGCGGC TTATGGATGG GGGAGCTGGC ACCTGGATTA 
CATAACGATA TCACGGATGT GCCCGGAGTC TTGGTGGGTC ATGTTTCTTT AATCAAAGGT
TACGGTCCCC TCATTCCCGG CGTGGGTCCT GTCCGCACCG GCATTACAGC CATTCGTCCT
CACCCGGGGA ATATCTATCG TGAGCCCTGC CGGGCGGGAA TTCACGTCAT GAATGGTTTT
GGCAAGTCTC TGGGTGTGCC TTATATCCAA GAGACCGGTC TGCTGAATTC TCCCATTTTC
TTAACTAATA CCTTGAGTGT CTATGACGCA GCTCAAGGAA TGCTGACTTA TTTGCTGCAG
GAAAATCCGG AGATAGGCCA TGATGCCCGA ACCCCTAATT TGGTGGTTTT CGAATGCGAT
GACTCCTATC TGAATGATAT CCGTGGCCGC CATGTGAAGC CCTGGGATGG GATTTTAGCC
CTGAACCGTG CCGCGGCAGG CCCGCTGGCT CAGGGATGTG TGGGGGCGGG AGTGGGAATG
TGCTTATTTC AGCTGAAAGG CGGGATTGGC AGTGCTTCAC GTATTGTTCC CAGCCAGGGC
AAAGATTATC GGGTGGGTAT GTTGGCCTTG ACCAACTTTG GGCATTTAGA AGATATGCTT
ATCAACGGTG TTCCGATAGG TTTAATGATG AAGAGGGCTA ACCTGCAAGA AATGCTTTGC
CAGGTTCCAG GCTCTCTTAT TTTAGTGGGT ATGACGGATG CTCCTCTCAG TTGCCGGCAA
CTGCATATGC TGGCGGCAAG GGCCCCTATG GGATTAGGCC GGACGGGGGG CATATCGCGG
ATGGGGAGCG GAGAGTTTTG CTTGATGGTC AGCAACACCG GCTTGGAATT TGAAGCACCG
CTCAGCGATT GGGAGCTGGA TCCCTTTTTT AAAGCAGTGG TGGAAATAAC GGCTGAAAGC
ATCTGGAATT CCCTGTTCTA TGCTACATCA ATGGTAGGGC GGGATTGGCA TTTATGCCAA
GCGCTTCCCA TTGCCGAAGT ATTATCCTGG ATGGGCTAA
 
Protein sequence
MERRSARSCG LWMGELAPGL HNDITDVPGV LVGHVSLIKG YGPLIPGVGP VRTGITAIRP 
HPGNIYREPC RAGIHVMNGF GKSLGVPYIQ ETGLLNSPIF LTNTLSVYDA AQGMLTYLLQ
ENPEIGHDAR TPNLVVFECD DSYLNDIRGR HVKPWDGILA LNRAAAGPLA QGCVGAGVGM
CLFQLKGGIG SASRIVPSQG KDYRVGMLAL TNFGHLEDML INGVPIGLMM KRANLQEMLC
QVPGSLILVG MTDAPLSCRQ LHMLAARAPM GLGRTGGISR MGSGEFCLMV SNTGLEFEAP
LSDWELDPFF KAVVEITAES IWNSLFYATS MVGRDWHLCQ ALPIAEVLSW MG