Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3086 |
Symbol | |
ID | 7260097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3303956 |
End bp | 3304843 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643563006 |
Product | Citryl-CoA lyase |
Protein accession | YP_002459545 |
Protein GI | 219669110 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000118565 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTA TGAGATCCGT TATGTACATT CCCGGAAACA ATCCTAAAAT GGTGGCTAAA GCACCTGAAA TTCCTGCCGA CATCATTACC TTCGATTTAG AGGATGCTGT ACCACCCGCG GAAAAAGAAA CAGCTCGTCA GATCGTAAGA GAGAATTTAG AATATGGTGC CAAAGGTGGC GCCCAAGTAT TTGTCCGTAT CAATAACTGG GAAACCGGCT TAACCAATGA TGACCTGGAA GCCATCGTTT GGCCTGGCCT CAATGGCGTT ACCTTGGCAA AAACCGGTTG TGCCGCAGAC GTACAACGTC TGGAGTGGAA ACTGGAAGAG CTGGAAATGC GCCGCGGAAT TCCTGTCGGA ACTGTAAAAA TCTCCATGCT TCTGGAAACA GCTAAAGGTA TTGCCCACGC TGAAGAATGC TGCTTAGCCA GCAAGCGCAA TGTCAATGCT ATCTTTGGTG CTGTTGACTA TTGCCGTGAC ATGCGCGTCA AAATCACTAA TGAAGCTGTT GAACAGCAAT ATGGCCGTGC AAAAGTGGGC GTAGCCTGCC GTGCTGCCGG AATCGTTGCT ATCGACGCTC CTTTCGTTGA TTATGCCAAT ATCCCTGCCT TTGAAAAGAA CGTTGCCGAA GGTAAGCAAA TGGGTTATGA AGGCCGTATG ATCATTCATC CAGGACAAGT TGAACCTTCC AACAGAATGT ATGCTCCGGA TCCTGCCGAT GTTAAATGGG CAAATGACGT CGTAAAAGTC TTTGAAGAAG AAGGTCTGGC CAAAGGCAAA GCTGCCGTTT CCTTAAATGG AAAAATGGTT GATACCCCCG TTTATCTCAA TGCCAAAGAT ATCTTAGCTT CTCAAGCTGA AATTGATGCT AAAACCGCCG GCAAATAA
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Protein sequence | MAVMRSVMYI PGNNPKMVAK APEIPADIIT FDLEDAVPPA EKETARQIVR ENLEYGAKGG AQVFVRINNW ETGLTNDDLE AIVWPGLNGV TLAKTGCAAD VQRLEWKLEE LEMRRGIPVG TVKISMLLET AKGIAHAEEC CLASKRNVNA IFGAVDYCRD MRVKITNEAV EQQYGRAKVG VACRAAGIVA IDAPFVDYAN IPAFEKNVAE GKQMGYEGRM IIHPGQVEPS NRMYAPDPAD VKWANDVVKV FEEEGLAKGK AAVSLNGKMV DTPVYLNAKD ILASQAEIDA KTAGK
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