Gene Dhaf_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3086 
Symbol 
ID7260097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3303956 
End bp3304843 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content47% 
IMG OID643563006 
ProductCitryl-CoA lyase 
Protein accessionYP_002459545 
Protein GI219669110 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000118565 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTA TGAGATCCGT TATGTACATT CCCGGAAACA ATCCTAAAAT GGTGGCTAAA 
GCACCTGAAA TTCCTGCCGA CATCATTACC TTCGATTTAG AGGATGCTGT ACCACCCGCG
GAAAAAGAAA CAGCTCGTCA GATCGTAAGA GAGAATTTAG AATATGGTGC CAAAGGTGGC
GCCCAAGTAT TTGTCCGTAT CAATAACTGG GAAACCGGCT TAACCAATGA TGACCTGGAA
GCCATCGTTT GGCCTGGCCT CAATGGCGTT ACCTTGGCAA AAACCGGTTG TGCCGCAGAC
GTACAACGTC TGGAGTGGAA ACTGGAAGAG CTGGAAATGC GCCGCGGAAT TCCTGTCGGA
ACTGTAAAAA TCTCCATGCT TCTGGAAACA GCTAAAGGTA TTGCCCACGC TGAAGAATGC
TGCTTAGCCA GCAAGCGCAA TGTCAATGCT ATCTTTGGTG CTGTTGACTA TTGCCGTGAC
ATGCGCGTCA AAATCACTAA TGAAGCTGTT GAACAGCAAT ATGGCCGTGC AAAAGTGGGC
GTAGCCTGCC GTGCTGCCGG AATCGTTGCT ATCGACGCTC CTTTCGTTGA TTATGCCAAT
ATCCCTGCCT TTGAAAAGAA CGTTGCCGAA GGTAAGCAAA TGGGTTATGA AGGCCGTATG
ATCATTCATC CAGGACAAGT TGAACCTTCC AACAGAATGT ATGCTCCGGA TCCTGCCGAT
GTTAAATGGG CAAATGACGT CGTAAAAGTC TTTGAAGAAG AAGGTCTGGC CAAAGGCAAA
GCTGCCGTTT CCTTAAATGG AAAAATGGTT GATACCCCCG TTTATCTCAA TGCCAAAGAT
ATCTTAGCTT CTCAAGCTGA AATTGATGCT AAAACCGCCG GCAAATAA
 
Protein sequence
MAVMRSVMYI PGNNPKMVAK APEIPADIIT FDLEDAVPPA EKETARQIVR ENLEYGAKGG 
AQVFVRINNW ETGLTNDDLE AIVWPGLNGV TLAKTGCAAD VQRLEWKLEE LEMRRGIPVG
TVKISMLLET AKGIAHAEEC CLASKRNVNA IFGAVDYCRD MRVKITNEAV EQQYGRAKVG
VACRAAGIVA IDAPFVDYAN IPAFEKNVAE GKQMGYEGRM IIHPGQVEPS NRMYAPDPAD
VKWANDVVKV FEEEGLAKGK AAVSLNGKMV DTPVYLNAKD ILASQAEIDA KTAGK