Gene Dhaf_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3085 
Symbol 
ID7260096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3302515 
End bp3303771 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content48% 
IMG OID643563005 
ProductMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) 
Protein accessionYP_002459544 
Protein GI219669109 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000232423 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTA TTAAAAACCT GCGTGAAGAA GCTTTAGAAT TTCACAAAGT GCAACCGGGC 
AAGCTGGAAG TTCGTGTTAC TGTTCCGGCC CAGGACCGGG ATGATCTCAC CCTTGCTTAC
TCTCCGGGCG TTGCGGAACC GGTCAAGGAA ATTGCTGCCG ATCTGGAAAA CCTCGATATC
TACACCAATC ACGCCAACTA TGTCAGCATC GTTTCCAACG GAACAGCTAT TTTAGGTCTC
GGTGACCTGG GTGCCGCGGC TTCTATGCCG GTTATGGAAG GTAAATCACT CCTCTTCAAA
GCCTTTGGGG ATGTTGATGC CTTTCCTCTT TGCGTAAACA CAACCGATGT GGATAAAATT
GTCGAGATTG TTGAATTAAC CTCACCTACC TTTGGTGGTG TTAACTTAGA AGATATCAAA
GCTCCCGAAT GCTTTGAAAT CGAAGAAAAA CTTAAAGCCC GCGGTATTTT CAAAGGACCG
ATTTTCCATG ATGACCAACA TGGTACAGCT GTTGTTACTT TAGCCGGTTT AGTCAATGCA
CTTAAGGTCG TAGGCAAGAA AATCGAAGAC ATTAAAGTCG TCGCTAATGG TGCAGGCGCA
GCGGGCATCG CGATCATTAA GCTTCTCATG AGCATGGGCT TGAAAAACGT GATCATGTGC
GATACCAAAG GAGCGATTTA CGAAGGTCGT ACAGTAGGTA TGAATCCTTG GAAAGAAGAA
ATCGCTAAAG CAACCAATCC TGAGAAATTC AGCGGTGATC TTGCTGGTGC TTTGGTCGGT
GCCGATGCCT TCATCGGAAT TTCCGCGGCT AATGTCCTCA ATGAAGACAT GATCCGTTCC
ATGGCTAAAG ATCCCATCGT CTTCTGCCAA GCTAATCCTA TACCGGAAAT CTGGCCCATC
GAAAGAGCGT TTGAGGCCGG TGCCAAAGTT ATTTCCACCG GACGCTCCGA CGTGATCAAC
CAGATCAATA ACGTGCTGGC CTTCCCGGGA ATGTTCCGCG GAGCGATTGA TGTGCGGGCC
ACCGATATCA ACGATGCTAT GAAAGTTGCT GCTGCCTATG CCATTGCCGG TATTGTCAAG
GATGAAGAAC TCAGTGCCGA TTATATCATT CCCAGCACCT TCAATCCGGA AGTTGCTCCT
GCAGTAGCGG CCGCAGTCGC TAAAGCAGCC ATAGATTCCG GCATTGCCAG ACGCCCCATG
GATCCTCAGG AAGTTGCTGA TGGACTTAAA AAGAGATTAG CAAACCAATA TAAATAA
 
Protein sequence
MSRIKNLREE ALEFHKVQPG KLEVRVTVPA QDRDDLTLAY SPGVAEPVKE IAADLENLDI 
YTNHANYVSI VSNGTAILGL GDLGAAASMP VMEGKSLLFK AFGDVDAFPL CVNTTDVDKI
VEIVELTSPT FGGVNLEDIK APECFEIEEK LKARGIFKGP IFHDDQHGTA VVTLAGLVNA
LKVVGKKIED IKVVANGAGA AGIAIIKLLM SMGLKNVIMC DTKGAIYEGR TVGMNPWKEE
IAKATNPEKF SGDLAGALVG ADAFIGISAA NVLNEDMIRS MAKDPIVFCQ ANPIPEIWPI
ERAFEAGAKV ISTGRSDVIN QINNVLAFPG MFRGAIDVRA TDINDAMKVA AAYAIAGIVK
DEELSADYII PSTFNPEVAP AVAAAVAKAA IDSGIARRPM DPQEVADGLK KRLANQYK