Gene Dhaf_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3057 
Symbol 
ID7260068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp3276942 
End bp3277568 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content49% 
IMG OID643562977 
Productendonuclease III 
Protein accessionYP_002459516 
Protein GI219669081 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG TAAACTCTAT TCTCAGCATC TTAGCGGCGA CCTATCCCGA GGCCCATTGT 
GAACTCAATT TCTCCACCCC ATTTGAGCTG CTGATTGCCA CGATGTTGAG CGCTCAGGCT 
ACGGATAAAA AAGTAAATCA AGTCACGGCA AGACTGTTTA GAGATTACAA AACCCCTGAA 
CAGTTCTTAA CCATGTCTTT AGCGGAAATG GAACAGGCTA TCAAAGAGCT GGGGCTTTAT 
CATAATAAAG CTAAAAATAT TTTAGCTACC TGCCATATCT TAGTTGCGAA CTATGGCGGA 
GAAGTCCCCG GCTCCATGGA AGCTCTGACT CAACTCCCCG GTGTGGGAAG AAAAACAGCC 
AATGTGGTAC TCAGCAATGC TTTTCATATC CCCGCCATGG CCGTAGACAC TCATGTTTTA 
CGAGTCTCCA ACCGGTTAGG GCTGGCCTCA GGGACGAATC CTGATCTGAT CGAGAAGCAG 
TTGATGAGCT GTATTCCCTG TTCCCAATGG ATTCAAGCCC ATCATTGGCT CATTTGGCAC 
GGACGGAGAA TCTGTGCCGC CCGCAACCCC AAATGTCCGG AATGCCCCCT GTCACCACTA 
TGCCCCAGCA GATTATTGCC GGCTTGA
 
Protein sequence
MSNVNSILSI LAATYPEAHC ELNFSTPFEL LIATMLSAQA TDKKVNQVTA RLFRDYKTPE 
QFLTMSLAEM EQAIKELGLY HNKAKNILAT CHILVANYGG EVPGSMEALT QLPGVGRKTA 
NVVLSNAFHI PAMAVDTHVL RVSNRLGLAS GTNPDLIEKQ LMSCIPCSQW IQAHHWLIWH 
GRRICAARNP KCPECPLSPL CPSRLLPA