| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3029 |
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| Symbol | |
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| ID | 7260040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3247592 |
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| End bp | 3250381 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643562949 |
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| Product | DnaQ family exonuclease/DinG family helicase |
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| Protein accession | YP_002459488 |
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| Protein GI | 219669053 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAG GAAAAATAGT AGTTATTGAT ATTGAAACCA CCGGATTTGA TATCTATAAC
GATGAAATCA TAGAATTTGC TGCCCTGTGC ATTGAAGAGG GGGAGGAAGC GGAGGCTTTC
AGCGTTTTAA TCTCACCCCG GAGGCAAGTT CCGGAGCGGA TTTTACGACT GACGGGTATC
TCTCCGGAGG AACTAAAGCA AGCCGGTTCC CTTCAGGCTT ATCGTGATAA AATTCTGGAT
CTCTTCCAGG ATGCCATTAT CGTGGGGCAT AATGTGGAGT TTGATTTAGG GTTTCTCGAG
CAGGCCTTAA CTATTCATTT TGAAAACACT CTCTGGGATA CATTGGAGAT TGCCCGCATC
CTTTACCCGA ATATGCCCAA ATACAAACTG GGCGACTTAA CCAAGAGTCT CGGTTTGACG
CCCCTGGAAA AGGCCCACCG GGCATTATTT GACGCCCGGG CCGCTTGGGA GCTGCTGCAA
GCCTGCTGGG AAAAAGGGTT GACTTTGGAT TTGGGTTTCT ACCAAAGAGC CCTTGCCCTT
GCCGGTAACG CACGGGTGGC CGGCTTTTTG CGGGAATTAG AGAAAACCGT CAAGCGAAAA
TTTCCTGAAC GCCTGATTCG AACCGACCTA GTGCTTTATG AGCAGGATTT AGGCCTTTTT
GAAGAGTTAG AGGAGGAAGA AACCTTCTCA GAAGACGTGG GATGGATTGA ATCCTGCTTT
TCTTCAGGGG GCATTCTGGA AAATAAACTT AAAAGTTATG AAAGCCGTCT TGGCCAGCTG
CAGATGGCCA AAGCCGTGGG TGAGTCCTTG ACAGGCTCGA CTCATATCGT CATCGAGGCT
GGAACGGGTA CAGGGAAATC CTATGCCTAT TTAATTCCCG GCCTGTGGTG GTCTAAAAAA
ACAGGCAAAA AAGTCGTGGT GGCTACGCAT ACCATTCCTT TACAGGAGCA GATTTTTAAA
AAAGATCTTC CTCTGCTTGC TCAGGTCCTG CCCTTTTCTT TCCGTGGGGC CTTATTGAAA
GGAAAATCAA ATTATATATG CTTGAAAAGA TGGTCTTTTA CCCTGGGCGT CACTGCGGAA
TTAGCTCCAG GTGAACGGCT GGCGCTGCTC AGCGTTATGG TGTGGCTTAG GGAAACAACC
ACCGGGGATT GGCAGGAGGT CTCCCAAATT CCCAGCCTGA ACAAGCTATG GGGGAGCCTG
AATTGCGAGG AAGAGAGCTG CATCCCTGGA AAATGCTCTC ACGCCAATCG CTGTTATATG
CTGCAGTCCC GTAAACGCGC CGAAGAGGCC GACTTGATCA TCGTTAATCA CTCTCTCCTC
TTTTCGGATA TCAAAACAGA GAAGAATATC CTGCCCGAAT ACCATGAATT GATCATAGAC
GAGGCCCACC ATCTCCATCA AGCGGCTTTG GAGCAATTAG GCAATGAGAT CAGCCTGGAA
CAGATTTCCC GGGTCCTGAA TTTGCTCAGC CGTTCTATGG CCGGCAGTTT CTACGGGAAT
GTCAAAGCAA GGGCTCAAGT CTGGGAACGC CTTCTTTCCG TGGCTCTTTG GGAACGTTTT
CGCGGCTATC TTGAGAAACT ACCGGAAGCC TGTGATGAAC TCTATCAACA GGCTGAAGAA
CTTTTTGCCA CCTTTGCCCA AATAGTGGGA AATGAACTTT CCTATCGCTT AACGGTTCAC
TGCCACCAGG AAAGCTGGTG GCCAACTGTC GCCGTGCAAA TCGAAAATTT GTTAGGGCGG
CTTAAGATCA TAACGGATTT ATTGAAAGCC ATGCTTAATC TTCTGGATGC TCAGGATGAT
GAGGATTCGG CAGCTCTTGC CCATGAGATT TCAGGGCGAA TACGGAATCT TGAAGAGATG
CGAGAGTGTT TCGTTCTTGC TCAGCAAGTG GATCAGCCTA CCCGGGTCAG TTGGCTGGAA
CAAAGCAATC GGATTCTGCT GAAAACCTCG CCGGTGGATG TGAGCAACCT TCTTAAGGAG
AAACTGTTTG CACCCCTGGA CTGCGCTGTT TTGACTTCCG CGACCATCAG CATTGCCAAT
TCCTTTCAGC ACTTTTTGCG GGAAATTGGT TTAGATGAAA GTACGCCGTC TTTATTGGTG
GATTCTCCTT TCGATTATGA GCGTCAGATG CAGCTTCTGG TCGTAAAGGA CTTAGTGGAT
GTTAAGCATT GCGATTTGTT CAATACAGAG GAAGTGGCGC TTTTTATATC TGAGGTAACT
GAGCGTATGC AGGGGAGAAC CCTGGTGCTT TTTACCTCCC ATCGCTTTTT ACGGGAGATT
CACTTGCCTT TAAGCCGCTA CCTGGGAGGC TCAGGAATTG AACTGCTGGC TCAAGGTATA
GACGGAGGAC GTCAGGCCAT TCTCGAAGCA TTTCTCAACA ACTCCAGGAG TGTTTTGTTG
GGGGCCAGTA GTTTCTGGGA AGGTATTGAT ATCCCTGGAG ATGCCTTGTC CTGTGTTATT
CTCGTAAAAT TACCTTTTGG CCCGCCTAAT CGCCCGCTTA TTGCAGCACG GTCGGAGTAT
CTTGAAGCAC AAGGGAGAAA TCCTTTCTAC GAGTTTCTTC TTCCCGAGGC TGTACTTCGG
TTTAAACAAG GCTTTGGCCG CTTAATCCGC TCTAAGTCGG ATCGAGGGCT GGTGATTCTA
TGCGATGGCC GGGTCATTCA TAAGCGCTAT GGGAGACATT TCTTGAGTTC CCTGCCGGTC
AAAACTCATA TTCGAACCAG CAGGTCGCAA ATTCTCGACA AAATTGATCT GTGGTTTGAC
GAGGAATATC AAAAGGAACT GCTTTTATAA
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| Protein sequence | MIKGKIVVID IETTGFDIYN DEIIEFAALC IEEGEEAEAF SVLISPRRQV PERILRLTGI
SPEELKQAGS LQAYRDKILD LFQDAIIVGH NVEFDLGFLE QALTIHFENT LWDTLEIARI
LYPNMPKYKL GDLTKSLGLT PLEKAHRALF DARAAWELLQ ACWEKGLTLD LGFYQRALAL
AGNARVAGFL RELEKTVKRK FPERLIRTDL VLYEQDLGLF EELEEEETFS EDVGWIESCF
SSGGILENKL KSYESRLGQL QMAKAVGESL TGSTHIVIEA GTGTGKSYAY LIPGLWWSKK
TGKKVVVATH TIPLQEQIFK KDLPLLAQVL PFSFRGALLK GKSNYICLKR WSFTLGVTAE
LAPGERLALL SVMVWLRETT TGDWQEVSQI PSLNKLWGSL NCEEESCIPG KCSHANRCYM
LQSRKRAEEA DLIIVNHSLL FSDIKTEKNI LPEYHELIID EAHHLHQAAL EQLGNEISLE
QISRVLNLLS RSMAGSFYGN VKARAQVWER LLSVALWERF RGYLEKLPEA CDELYQQAEE
LFATFAQIVG NELSYRLTVH CHQESWWPTV AVQIENLLGR LKIITDLLKA MLNLLDAQDD
EDSAALAHEI SGRIRNLEEM RECFVLAQQV DQPTRVSWLE QSNRILLKTS PVDVSNLLKE
KLFAPLDCAV LTSATISIAN SFQHFLREIG LDESTPSLLV DSPFDYERQM QLLVVKDLVD
VKHCDLFNTE EVALFISEVT ERMQGRTLVL FTSHRFLREI HLPLSRYLGG SGIELLAQGI
DGGRQAILEA FLNNSRSVLL GASSFWEGID IPGDALSCVI LVKLPFGPPN RPLIAARSEY
LEAQGRNPFY EFLLPEAVLR FKQGFGRLIR SKSDRGLVIL CDGRVIHKRY GRHFLSSLPV
KTHIRTSRSQ ILDKIDLWFD EEYQKELLL
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