Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3012 |
Symbol | |
ID | 7260022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 3232586 |
End bp | 3233377 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643562931 |
Product | polysaccharide deacetylase |
Protein accession | YP_002459471 |
Protein GI | 219669036 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000529365 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA TTGTCTTTAA ACGACCGGCT TTGCGCAATG CTATGCTCTG GGCTATCCTC TTATTCGTAG TCCTTGCTTA TCGTGAAAAT GTTATAGCAG TCTTTTCCAG CAAGCTCAAG CCCATTTACT CAGCAGAAGT TACCACCAGT GAAATTGGCC TGACTTTTGA TATCAGCTGG GGAGAAAAAA CCCCGGAACC GATTCTGGAT ATTTTGCAGG AAAAGGGCGT CAAAGCTACC TTCTTTTTAT CCAGCCCCTG GGCTGCCAAA CATGAAGATC TGGTAAAACG CATGGTGGCG GACGGTCACG AAATTGCTTC CCATGGCAAT CGGCATATTG ATTTAAACAC GTTAAGCCCG GGAGAGATTG AGCGTGAAAT TATGAGTGCC CACGAAGTTC TTCAACAGAT TACCGGTCAG AAAATCTCCT TGCTGAGACC ACCTAACGGG GCTTATGATA ATAAACTGAT CAGTGTCTCA CAACGGCTCG GCTATCAAGT CATTCAATGG AGTGTGGATT CCCTGGATTG GAAACGTCCC GGACCGGAAG CGGTTATCCA TAATGTGCTG AATGGTCTTC CTAACGGGCA TGGTGCAGGG CCGGGGGATA TCATCCTTTT CCATGCCTCA GACTCCGCTC CGGACACGAT TAAAGCCCTG CCGGTGGTGA TCGATCAGCT GAGAGCCAAA AACTATCAAC TGGTCCCTGT CAGCCAATTG CTGAAAAGCG CCACCAAAAC CTGGCCGCCG GAAAGCAATC TCCCGCCACT GGAGCAAACA GGGTCCTCTT AA
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Protein sequence | MKFIVFKRPA LRNAMLWAIL LFVVLAYREN VIAVFSSKLK PIYSAEVTTS EIGLTFDISW GEKTPEPILD ILQEKGVKAT FFLSSPWAAK HEDLVKRMVA DGHEIASHGN RHIDLNTLSP GEIEREIMSA HEVLQQITGQ KISLLRPPNG AYDNKLISVS QRLGYQVIQW SVDSLDWKRP GPEAVIHNVL NGLPNGHGAG PGDIILFHAS DSAPDTIKAL PVVIDQLRAK NYQLVPVSQL LKSATKTWPP ESNLPPLEQT GSS
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