Gene Dhaf_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3002 
Symbol 
ID7260012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3223256 
End bp3223873 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID643562921 
ProductSNARE associated Golgi protein 
Protein accessionYP_002459461 
Protein GI219669026 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAGAAC AATTGCTGAC CACACTGGGA GAGTTCGTCG TCGAATTGAT TTCCAGCCTG 
GGCTACTTTG GCGTCTTTCT GGCCATGGCC ATCGAAAGTG CCTGTATCCC TCTCCCCAGT 
GAAATCATTC TCCCCTTTAC GGGATATATG GTCTACATAG GTCATTTTGA CTTTTGGACG 
GCTACTTTAG CGGCAACCTT AGGCAATCTT TTTGGCGGTC TCGTCGCCTA TTATGTGGGT 
GTCCGGGGAG GCCGGCCTTT TATTCAGCGT TATGGACATT ATTTTTTTAT CAAGGAAAAG 
GAATTGCAGT GGACTGAGCG TTTATTCAGC AGGCATGGGG AAATTACCGT CTTAGTGGGA 
CGTCTGCTGC CCGTGATACG AACCTTCATA TCCCTGCCCG CCGGTATAGC AAAAATGAGT 
GCCGTGAAAA TGGCCATCTA TACAGTACTG GGGGCACTGC CCTGGTGTAT GTTCTTAATC 
ATCGTCGGAG AAAAGCTGGG CGCTAACTGG AACTCACTTA AGCCATTATT CCACCGCCTG 
GATCTAGTGA TTGGTGTGCT CATCCTGGCA GGCATAGGTT ATTTCTTTTT TAAGCGCAAG 
GGCCGCAAAA GGCGGTAA
 
Protein sequence
MLEQLLTTLG EFVVELISSL GYFGVFLAMA IESACIPLPS EIILPFTGYM VYIGHFDFWT 
ATLAATLGNL FGGLVAYYVG VRGGRPFIQR YGHYFFIKEK ELQWTERLFS RHGEITVLVG 
RLLPVIRTFI SLPAGIAKMS AVKMAIYTVL GALPWCMFLI IVGEKLGANW NSLKPLFHRL 
DLVIGVLILA GIGYFFFKRK GRKRR