| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2983 |
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| Symbol | |
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| ID | 7259992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3202819 |
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| End bp | 3204756 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643562902 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002459442 |
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| Protein GI | 219669007 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.246414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATGA ATGATTTTGT ACAAATGATT CAGTCCGGTA AGATCAACTC CCAGTATTTT
GCCAAGGTAG GTCATGAAAG GAATCGTTTT CTGGAAGGAA AAGAAGTGGA TACAACAGTT
GTGCCCCGCG AGTTTATCGA TTCTTGGCAA AGATGCCGGG CCTATGGACT CGCTCCTTAT
ACCTTGGATT ATCGGGACGT GGATAGTGCC CAGAAAAAAG AGTTGTTTCA GACCATGGTA
AGAAAATATG AATTCTTTTT GAAAAATGTT TTTAATATTT TTGATTTGAA TGGCTATATA
TTTAAATTGC AGACCAAAGA GGGAATCAGT CAATTTTTGG GCAAATCCAC CCTGACCTTT
ATGGATTGTT CCGAAGAAAA AGGAGGAACG ACCAGTTCCT GTGTTTGCCT GCATGAGGAT
AAGCCTATCA TTATTTTTCA GCCTTTCTAT TATCGCCAGG CTTACATTAA ACATTTTTTT
GGTGAACTCC ACGGAGCATC AGCTCCCATT CATAATGAAC AAAATAAAGT GATCGGGGCT
TTGAGTTTGC TTACTCATAA GCCGGAATTT AGTATTCAGG CCTATCATCT GATTTCTCAG
ATCGCTAAAC TACATGACAA TCTGTATTTA CCGATTATGC TTGGGTATGA AAATCAAATA
GGGCAAATCA TCAATTGTCT TCCTCAGGGA GTTGCCTTAA TTTCAGAAAA GAATATCATC
AAATTTTATA ATGAAAAAAT AGCGGACTTG TTGGAGATAG ACGGAAAGAA AAACCCTGAA
CATGACCTGA AGAAGCGTTT GTTAAAAATC AGTAAATCCA GAGGGGCAGA TCTCGAACAA
AGCTCTTATG AAATAAAAGA TGACTTTACT AACCAGACGT TGAAGCTGGT TCAATTGGTG
GAAAAAAGTG AATCGGGAAA ACAGCTGGGC AAAGTTGAAA GAAACAATGA CCTATTTACA
TTTTACCAGA TTAAAGGAAG CAGCCCTTCC ATCCAGAAAG CGAAGGATAC GGCCGAAAAA
ATTGCCGATA CCCTTGTGCC GGTGATGATT TACGGTGAAA GCGGAACTGG GAAGGAAATG
TTTGCCCAAG CTATTCATAG TGCGAGCAAC CGTGCCGGCA GTCCATTCGT GGCCATAAAC
TGCGGGGCCA TTCCGGGAGA ATTGGTGGAA AGTGAGCTTT TTGGCTATGA GGGAGGCTCC
TTTACCGGAG CTCTGAAGGA TGGCAAGATT GGCAAGATCG AAGCAGCTTC CGGGGGCACT
TTGTTCCTGG ATGAGATTGA AAGTATGCCG TTGAAAGATC AAATAAAGCT CTTAAGAGTG
CTTTCCGCCG GCAAAGTTCA AAAAGTCGGA AGCACTACTG AGATTTCCGT GGATATTCGT
TTAATCTCCG CGACGAAAAC AGATCTCTTG ATGCAGGCTG ATGAAGGGCT ATTTCGCGAG
GATTTGTTTT ATCGCATCAG TACCTTTGTG ATTAATCTTC CCGCTTTAAG GGAAAGGAAG
GAAGACATTC TTTTGTTGGC AGAGGAATTC AGCCGCAGAT TACAAAAAAA ATACGACAAA
TCTTCTGTCT CAATGGATCA AGGGTTCATT AATGCCCTGA CAGCCTATAA ATGGCGGGGG
AATGTGCGGG AGCTGGAGCA TGCCATGGAA CATGCCTTCA TCATGCTGGG CAGGGGAGCA
GCCCTTCTGC CGGAGCATTT GTCGGTAAAG ATACAAGAAG CTTATCAAAG CAGGATCACC
GAAGAAGTTA TCGACGAAAC ACTGGAAGAG GAGAACGAGC ATAAATTTGG ATTACTTGCC
TTAGCTGAAC AAAAAATGAT TGAACGTGTG CTGGACTCTG TCAATGGGAA TATCAGTGCT
GCTGCAGAAC GTCTGGGAAT CAACCGCAGG ACAATTCATA GGAAACTACA GCGTAAGGAA
AGTTCTACGA CTTTTTAA
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| Protein sequence | MEMNDFVQMI QSGKINSQYF AKVGHERNRF LEGKEVDTTV VPREFIDSWQ RCRAYGLAPY
TLDYRDVDSA QKKELFQTMV RKYEFFLKNV FNIFDLNGYI FKLQTKEGIS QFLGKSTLTF
MDCSEEKGGT TSSCVCLHED KPIIIFQPFY YRQAYIKHFF GELHGASAPI HNEQNKVIGA
LSLLTHKPEF SIQAYHLISQ IAKLHDNLYL PIMLGYENQI GQIINCLPQG VALISEKNII
KFYNEKIADL LEIDGKKNPE HDLKKRLLKI SKSRGADLEQ SSYEIKDDFT NQTLKLVQLV
EKSESGKQLG KVERNNDLFT FYQIKGSSPS IQKAKDTAEK IADTLVPVMI YGESGTGKEM
FAQAIHSASN RAGSPFVAIN CGAIPGELVE SELFGYEGGS FTGALKDGKI GKIEAASGGT
LFLDEIESMP LKDQIKLLRV LSAGKVQKVG STTEISVDIR LISATKTDLL MQADEGLFRE
DLFYRISTFV INLPALRERK EDILLLAEEF SRRLQKKYDK SSVSMDQGFI NALTAYKWRG
NVRELEHAME HAFIMLGRGA ALLPEHLSVK IQEAYQSRIT EEVIDETLEE ENEHKFGLLA
LAEQKMIERV LDSVNGNISA AAERLGINRR TIHRKLQRKE SSTTF
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