| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2981 |
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| Symbol | |
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| ID | 7259990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3200882 |
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| End bp | 3202033 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643562900 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002459440 |
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| Protein GI | 219669005 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000586322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCTC TTTCAACAGC AAAAAAAGCG ACAAGTGACT ATTCATGGCT TTCACGACTC
AAGAACTCTA CCTGGATATT TACCAATAAA GACAGTGATT CCTTGGAACA TTGTTTAATA
CGTTTGCAGC AAGACTCGGA CAAGCCTCTC GTGGAAACCG TTAAGCAGGC TATCGACTTT
CAAGCCTATC AGGAAGCGCG TGATTATTTG GAGCGCATCT GGGGAAGATA TCCTGGCAAG
GAAGGAGAAA TTCAATACTT AATGGCTCGC TGCTATTTTG GTCAAGGTTT GATTCAGGAG
GCATTAATAT GCCTGGACAA AGCCTTAATC CATGGACCGG AAAGCACTGA ATATCTGGAA
CTGCAGGCTG ATTGCCTCAT GGAAAAAGAG GATTGGCGCG GGGCAGTGGA TGCCTTGAAT
AAAGCCATCT GGGCTAATCC CAAAAAAGTG GAGAATATTT ACCGTTTGGG AACCATTTAT
GCCTACCACA ACGAACCTCA CGAGGCTTTG CGTTGTTTTC AGGGATGTTG TGAGCTGAAA
CCCCACAACT CTTTGTATTG GGAGATGAAA GGTGAGATCC ATCTTCAACT GGAACAGATG
TCACAGGCTA TCATTAGCTT TGAAAAAGCT CTTCGTTATG AATATAATCC GGATCTCAAA
GCTCGCTTAG CTTATTGCTA CACTCAAATC AATGAACATC AAAAAGCAAT CCGACTTTAT
CGCCAGGTAT TAAAGCATGA CCCAGCTCAT TACGATTCCC TGTGTAATCT TGCGGCCATC
TATCAAAATA AAGGTGAATC CATGGAAGCG CTCAAACTGC AGGAGCGGGC CTATGGTTTG
TGTCAAAATG ATCCCGTGCT ACTGAATAAT ATGGCTTATA CTCTGGTTCA CCTGGGAAGG
ACAAGGAAAG CAACAGAATA CTATCAAGAA GCTCTTAAAT TAGCCCAAGC CAATCCGGTC
ATCCTCTATA ATCTAGCGGT ATGCCATACC CAGAAAGGGA ATTGGGATCA AGGCATTGAG
ATACTCTACC GACTATTGAA TATCGATCCG GATCATTCTG AGGGATGGGC ACTCCTGGGC
AATATTTATG ACCATCTCAC GGATCATGAA TCAGCTGTAG ATTGTTATAA TAAAGCTTTA
CAATTAGCGT AA
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| Protein sequence | MFPLSTAKKA TSDYSWLSRL KNSTWIFTNK DSDSLEHCLI RLQQDSDKPL VETVKQAIDF
QAYQEARDYL ERIWGRYPGK EGEIQYLMAR CYFGQGLIQE ALICLDKALI HGPESTEYLE
LQADCLMEKE DWRGAVDALN KAIWANPKKV ENIYRLGTIY AYHNEPHEAL RCFQGCCELK
PHNSLYWEMK GEIHLQLEQM SQAIISFEKA LRYEYNPDLK ARLAYCYTQI NEHQKAIRLY
RQVLKHDPAH YDSLCNLAAI YQNKGESMEA LKLQERAYGL CQNDPVLLNN MAYTLVHLGR
TRKATEYYQE ALKLAQANPV ILYNLAVCHT QKGNWDQGIE ILYRLLNIDP DHSEGWALLG
NIYDHLTDHE SAVDCYNKAL QLA
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