Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2920 |
Symbol | |
ID | 7259928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3131400 |
End bp | 3132839 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643562838 |
Product | histidine kinase |
Protein accession | YP_002459379 |
Protein GI | 219668944 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTGA AAGGACGACT TATTTCAGCC AATGCTTTAA CCGTAATCCT CCCGGTGATG ATTACGGTTA TTAGCGCTAT GGCTTATATT TATATTGCCG GCAAGCTGGC GGATACAGAG CAGGCCATTC ACAATACTCA GGAGGTTGCT CAGCTGACTA TGGAATTAGT CGGCCGTGAG AATAGTGTTC TTCGCCAAAA TCCTGAGAAA ATCAAGGACA GCTCCTTTCA AAAGGAGCTC CAGGCGCGGA TGGATATCCT GGATGGTGAA GTCGTGGTGC TGGAAGGGGA AAGGGTGCTT TTTTCCTCCC ACAACTTAAC GGCCATCGAT GTAGTTAAAT TGAAGAAACC GGCGATACAA TTCCGCAGTG CCCGGGTGGA TTTGGGAACC CAGTCTTACA CTGTTCAGTC CTTTGATGTA TCTCGTGACG AGGCGCAAGC GGAGAAGCAA ACTACCCTCT ATCTCCTTGT TCCGATCAAT CCGGCCTCCT TTGATATGAC GAATTTTTTA ATCTTTAGCG GCTTGGTATT TCTTTTGTCT TTTATCGGCG CCAATTCCAT TGCCTCCTAC TATTTTTCTT TGCGAATTCT TACCCCCCTT AACAACCTGC AGAAAGCGGC CATGGAAATC ACTTTAGGCA ATTTGGATTA TGAAATCGTC GAAGAAGGGG ACCAAGAGGT GCGGGAACTA TGCCGCGACC TTGAGCGCAT GCGTATTCAG TTAAAGAATT CTGTGCATAC CCAGCTTAAG TATGAGGATA ACCGCAAGAT GCTCATATCC AGTATTTCTC ACGACTTAAA GACCCCGGTG ACCTCCATTA AAGGCTATGT GGAAGGGCTG TTGGACGGTA TTGCCAATTC TCCGGAAAAG AAAGAAAAAT ACTTAAAGAC GATTTACCGC AAGGCGGAGC AAGTGGATAC TATGATCGAC GACTTGCTGC TCTATGCCAA ACTGGATCTT AACCAAATTC CCTTTAGTTT TGAAAAAACC AACATCGGGG AATTTTTAGA TGACGGACTT CAGGAAATAG AACCGGAGAT GGAGAGAAAC GGGATTAAAA TTCTCTTCGA ATCTGAGCTT ACCTCAGCTC AGGAAATTCC CCTGGATCGG GAACGCATGA TGCGGGTCAT TCTGAATATC ATCGATAATT CCCGTAAGTA TATGGATAAA GAAGAGGGTG TCATCACCCT ATCCTTGCGG GAAACCCATT CCAGCGTCAT CATCGAAATT AAGGATAATG GCCGGGGGAT ACCGAAAAAA GATGTGGCTC AGATCTTTGA GCGGTTTTAT CGCTCGGATA CGGCCCGCAC TGAAATCAAA GGCAGCGGAC TGGGCCTGGC TATCGCCAAA CAGATCGTGG AAGGGCATGA AGGCCGGATA TGGGCTGTCA GCCGGGAGGG TAAAGGGACC AGTGTGCTGA TCTCGCTGCC CCGGAGCTGA
|
Protein sequence | MNLKGRLISA NALTVILPVM ITVISAMAYI YIAGKLADTE QAIHNTQEVA QLTMELVGRE NSVLRQNPEK IKDSSFQKEL QARMDILDGE VVVLEGERVL FSSHNLTAID VVKLKKPAIQ FRSARVDLGT QSYTVQSFDV SRDEAQAEKQ TTLYLLVPIN PASFDMTNFL IFSGLVFLLS FIGANSIASY YFSLRILTPL NNLQKAAMEI TLGNLDYEIV EEGDQEVREL CRDLERMRIQ LKNSVHTQLK YEDNRKMLIS SISHDLKTPV TSIKGYVEGL LDGIANSPEK KEKYLKTIYR KAEQVDTMID DLLLYAKLDL NQIPFSFEKT NIGEFLDDGL QEIEPEMERN GIKILFESEL TSAQEIPLDR ERMMRVILNI IDNSRKYMDK EEGVITLSLR ETHSSVIIEI KDNGRGIPKK DVAQIFERFY RSDTARTEIK GSGLGLAIAK QIVEGHEGRI WAVSREGKGT SVLISLPRS
|
| |