Gene Dhaf_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2920 
Symbol 
ID7259928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3131400 
End bp3132839 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content47% 
IMG OID643562838 
Producthistidine kinase 
Protein accessionYP_002459379 
Protein GI219668944 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGA AAGGACGACT TATTTCAGCC AATGCTTTAA CCGTAATCCT CCCGGTGATG 
ATTACGGTTA TTAGCGCTAT GGCTTATATT TATATTGCCG GCAAGCTGGC GGATACAGAG
CAGGCCATTC ACAATACTCA GGAGGTTGCT CAGCTGACTA TGGAATTAGT CGGCCGTGAG
AATAGTGTTC TTCGCCAAAA TCCTGAGAAA ATCAAGGACA GCTCCTTTCA AAAGGAGCTC
CAGGCGCGGA TGGATATCCT GGATGGTGAA GTCGTGGTGC TGGAAGGGGA AAGGGTGCTT
TTTTCCTCCC ACAACTTAAC GGCCATCGAT GTAGTTAAAT TGAAGAAACC GGCGATACAA
TTCCGCAGTG CCCGGGTGGA TTTGGGAACC CAGTCTTACA CTGTTCAGTC CTTTGATGTA
TCTCGTGACG AGGCGCAAGC GGAGAAGCAA ACTACCCTCT ATCTCCTTGT TCCGATCAAT
CCGGCCTCCT TTGATATGAC GAATTTTTTA ATCTTTAGCG GCTTGGTATT TCTTTTGTCT
TTTATCGGCG CCAATTCCAT TGCCTCCTAC TATTTTTCTT TGCGAATTCT TACCCCCCTT
AACAACCTGC AGAAAGCGGC CATGGAAATC ACTTTAGGCA ATTTGGATTA TGAAATCGTC
GAAGAAGGGG ACCAAGAGGT GCGGGAACTA TGCCGCGACC TTGAGCGCAT GCGTATTCAG
TTAAAGAATT CTGTGCATAC CCAGCTTAAG TATGAGGATA ACCGCAAGAT GCTCATATCC
AGTATTTCTC ACGACTTAAA GACCCCGGTG ACCTCCATTA AAGGCTATGT GGAAGGGCTG
TTGGACGGTA TTGCCAATTC TCCGGAAAAG AAAGAAAAAT ACTTAAAGAC GATTTACCGC
AAGGCGGAGC AAGTGGATAC TATGATCGAC GACTTGCTGC TCTATGCCAA ACTGGATCTT
AACCAAATTC CCTTTAGTTT TGAAAAAACC AACATCGGGG AATTTTTAGA TGACGGACTT
CAGGAAATAG AACCGGAGAT GGAGAGAAAC GGGATTAAAA TTCTCTTCGA ATCTGAGCTT
ACCTCAGCTC AGGAAATTCC CCTGGATCGG GAACGCATGA TGCGGGTCAT TCTGAATATC
ATCGATAATT CCCGTAAGTA TATGGATAAA GAAGAGGGTG TCATCACCCT ATCCTTGCGG
GAAACCCATT CCAGCGTCAT CATCGAAATT AAGGATAATG GCCGGGGGAT ACCGAAAAAA
GATGTGGCTC AGATCTTTGA GCGGTTTTAT CGCTCGGATA CGGCCCGCAC TGAAATCAAA
GGCAGCGGAC TGGGCCTGGC TATCGCCAAA CAGATCGTGG AAGGGCATGA AGGCCGGATA
TGGGCTGTCA GCCGGGAGGG TAAAGGGACC AGTGTGCTGA TCTCGCTGCC CCGGAGCTGA
 
Protein sequence
MNLKGRLISA NALTVILPVM ITVISAMAYI YIAGKLADTE QAIHNTQEVA QLTMELVGRE 
NSVLRQNPEK IKDSSFQKEL QARMDILDGE VVVLEGERVL FSSHNLTAID VVKLKKPAIQ
FRSARVDLGT QSYTVQSFDV SRDEAQAEKQ TTLYLLVPIN PASFDMTNFL IFSGLVFLLS
FIGANSIASY YFSLRILTPL NNLQKAAMEI TLGNLDYEIV EEGDQEVREL CRDLERMRIQ
LKNSVHTQLK YEDNRKMLIS SISHDLKTPV TSIKGYVEGL LDGIANSPEK KEKYLKTIYR
KAEQVDTMID DLLLYAKLDL NQIPFSFEKT NIGEFLDDGL QEIEPEMERN GIKILFESEL
TSAQEIPLDR ERMMRVILNI IDNSRKYMDK EEGVITLSLR ETHSSVIIEI KDNGRGIPKK
DVAQIFERFY RSDTARTEIK GSGLGLAIAK QIVEGHEGRI WAVSREGKGT SVLISLPRS